DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1 and AT5G20500

DIOPT Version :9

Sequence 1:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_197550.1 Gene:AT5G20500 / 832172 AraportID:AT5G20500 Length:135 Species:Arabidopsis thaliana


Alignment Length:108 Identity:54/108 - (50%)
Similarity:70/108 - (64%) Gaps:7/108 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VGSALRSPIVDMSTKQAKFVENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDG 68
            |.||..||       :|.||:.||:|:|:|||||:|||||..||..|::|:....::|||...||
plant    23 VSSAASSP-------EADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDG 80

  Fly    69 NEIQAVLGEITGARTVPRVFIDGKFIGGGTDIKRMFETGALQK 111
            ..||..||||.|.||||:|||:||.:||..|....:|:|.|.|
plant    81 WSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 42/79 (53%)
AT5G20500NP_197550.1 GRX_GRXh_1_2_like 43..124 CDD:239511 43/81 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 80 1.000 Domainoid score I2990
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2092
OMA 1 1.010 - - QHG53522
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 1 1.000 - - FOG0000858
OrthoInspector 1 1.000 - - mtm1143
orthoMCL 1 0.900 - - OOG6_100315
Panther 1 1.100 - - O PTHR45694
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X228
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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