DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grx1 and ROXY2

DIOPT Version :9

Sequence 1:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_196911.1 Gene:ROXY2 / 831256 AraportID:AT5G14070 Length:140 Species:Arabidopsis thaliana


Alignment Length:105 Identity:34/105 - (32%)
Similarity:46/105 - (43%) Gaps:18/105 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDGNEIQAVL--------GEIT 79
            :|:..|.|.|||||.:.|..|...|..|:.:.|...:.|||..|.|.||...|        |..|
plant    34 IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGAT 98

  Fly    80 GARTVPRVFIDGKFIG----------GGTDIKRMFETGAL 109
            ....:|.|||.||.:|          .|:.:..:.:.|||
plant    99 SPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGAL 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 31/97 (32%)
ROXY2NP_196911.1 GlrX-like_plant 37..140 CDD:274023 33/102 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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