DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1 and AT3G21460

DIOPT Version :9

Sequence 1:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_001078198.1 Gene:AT3G21460 / 5008019 AraportID:AT3G21460 Length:102 Species:Arabidopsis thaliana


Alignment Length:85 Identity:29/85 - (34%)
Similarity:46/85 - (54%) Gaps:1/85 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IASNK-VVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDGNEIQAVLGEITGARTVPRVFID 90
            :||.: ||||||:.|......|..|.:..|...|:|:|.:..|.:|:..|..:..:.|||.||:.
plant     7 LASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLGCSPTVPAVFVG 71

  Fly    91 GKFIGGGTDIKRMFETGALQ 110
            |||:|....:..:...|:|:
plant    72 GKFVGTANTVMTLHLNGSLK 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 27/81 (33%)
AT3G21460NP_001078198.1 GlrX-like_plant 4..102 CDD:274023 29/85 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1535999at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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