DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1 and txnrd3

DIOPT Version :9

Sequence 1:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_898895.2 Gene:txnrd3 / 352924 ZFINID:ZDB-GENE-030327-3 Length:602 Species:Danio rerio


Alignment Length:89 Identity:41/89 - (46%)
Similarity:57/89 - (64%) Gaps:0/89 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDGNEIQAVLGEITGARTVPRV 87
            ::..|.|:.||:|||::||:|...|:.||:|||....||||...||...|.:|.|:||.:|||.|
Zfish    17 IKELIDSSAVVVFSKSFCPFCVKVKDLFKELNVKYNTIELDLMEDGTNYQDLLHEMTGQKTVPNV 81

  Fly    88 FIDGKFIGGGTDIKRMFETGALQK 111
            ||:.|.|||..:..:..:.|.|||
Zfish    82 FINKKHIGGCDNTMKAHKDGVLQK 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 37/79 (47%)
txnrd3NP_898895.2 GRX_GRXh_1_2_like 25..106 CDD:239511 39/81 (48%)
TGR 114..602 CDD:273624
NADB_Rossmann 114..>160 CDD:304358
Pyr_redox 295..371 CDD:278498
Pyr_redox_dim 474..584 CDD:280934
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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