DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6865 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_001246825.1 Gene:CG6865 / 40050 FlyBaseID:FBgn0036817 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:267 Identity:84/267 - (31%)
Similarity:134/267 - (50%) Gaps:36/267 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QPCSVR-------NPKIVGGSEAERNEMPYMVSLMRRGGHFCGGTIISERWILTAGHCICNGLQQ 83
            |.|..|       ..:|:||::||..:.|:.|||.....|.||||:||..|:|||.||    .:.
  Rat   170 QECGARPDLITLSEERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHC----FRS 230

  Fly    84 FMKPAQIQGVVGLHSIREYLNGIGNGPDALRVDFKNIVPHPQYDCNDVKHDIALLELVQPIRFSS 148
            :..|.|.....|:.:|          ...|||..:.|:.|.:|:.....:|||:::|.:|:.|:.
  Rat   231 YSNPQQWTATFGVSTI----------SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTR 285

  Fly   149 HIQPSCVGSEEGHRSLEQEYGTVSGWG-WTH-ENQAENDRSDVLRKATVKIWNNEACERSYRSLG 211
            :|...|:.:.. ...:......|:||| .|: .|...|     |::..|:|.::|.|.   ...|
  Rat   286 NIHRVCLPAAT-QNIIPDSVAYVTGWGSLTYGGNTVTN-----LQQGEVRIVSSEVCN---EPAG 341

  Fly   212 KSNTIGETQLCAGYENGQIDSCWADSGGPLMSKEHH----LVGVVSTGIGCARPGLPGIYTRVSK 272
            ...::....||||..:|.:|:|..||||||:.::..    :||:||.|..|..|..||:||||:.
  Rat   342 YGGSVLPGMLCAGVRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTA 406

  Fly   273 YVSWMQK 279
            |.:|:::
  Rat   407 YRNWIRQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6865NP_001246825.1 Tryp_SPc 34..276 CDD:214473 80/247 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 81/251 (32%)
Blue background indicates that the domain is not in the aligned region.

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