DRSC/TRiP Functional Genomics Resources

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Protein Alignment LMO2 and Bx

DIOPT Version :10

Sequence 1:NP_005565.2 Gene:LMO2 / 4005 HGNCID:6642 Length:227 Species:Homo sapiens
Sequence 2:NP_001259687.1 Gene:Bx / 32846 FlyBaseID:FBgn0265598 Length:424 Species:Drosophila melanogaster


Alignment Length:192 Identity:80/192 - (41%)
Similarity:93/192 - (48%) Gaps:38/192 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    28 SGGDGGGGGGARAPEGVRAPAAGQPRATKGAPPPPGTPPPSPMSSAIERKSLDPSEEPVDEVLQI 92
            |||.|||..|....:.:.|.|............                                
  Fly    58 SGGAGGGNNGNGNVQSIAAAANNNNNNNNNGSQ-------------------------------- 90

Human    93 PPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLF 157
                 .|.||.::|.|||.|:|:|..||||||.|..|.|||||||..||.|....||:|||||||
  Fly    91 -----LCAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLF 150

Human   158 GQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE 219
            |..|.||:|.|.|.|:||.||.:..|||||||.|..|...||||||:.|..:.|:||.| ||
  Fly   151 GNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYD-YE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LMO2NP_005565.2 LIM1_LMO2 99..154 CDD:188770 32/54 (59%)
LIM2_LMO2 163..218 CDD:188771 30/54 (56%)
BxNP_001259687.1 LIM1_LMO1_LMO3 92..146 CDD:188774 31/53 (58%)
LIM2_dLMO 156..210 CDD:188776 30/54 (56%)

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