DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy and ttdT

DIOPT Version :10

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_417535.1 Gene:ttdT / 947576 ECOCYCID:EG12393 Length:487 Species:Escherichia coli


Alignment Length:567 Identity:116/567 - (20%)
Similarity:221/567 - (38%) Gaps:130/567 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 WKGL----VVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMG- 100
            |:.|    |:.::.||.:|..|.|....:..::..:::.:  :.|.:|..|.:|:.|....|:. 
E. coli     8 WRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGL--ILEPVPGAVVAMVGISIIAILSP 70

  Fly   101 --IMSSDQTCRLYFKDT---------------LVMFMGGIMVALAVEYCNLHKRLALRVIQIVGC 148
              :.|.:|..:..||.|               :.:.....|.....|...|.:|:||.:::.:|.
E. coli    71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGH 135

  Fly   149 SPRRLHFGLIMVTMFLS-MWISNAACTA-MMCPIIQAVLEELQAQGVCKINHEPQYQIVGGNKKN 211
            ....|.:.::...:.|: :..||:|..| ::.|||:              |..|.||    ::.|
E. coli   136 RTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIR--------------NLPPLYQ----SQPN 182

  Fly   212 NEDEPPYPTKITLCYYLGIAYASSLGGCGT----IIGTATNLTFKGIYEARFKNSTEQMDFPTFM 272
            :.......:.|   .::||     :..|.|    :...|.||...|:.::....:....|:  |:
E. coli   183 DSSSRSIGSYI---MWMGI-----VADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDW--FL 237

  Fly   273 FYSVPSMLVYTLLTFVFLQWHFMGLWRPKSKEAQEVQRGREGADVAKKVIDQRYKDLGPMSIHEI 337
                 .||..::|..:.:.|....|:.|..|...:|.|..|          ...:.:||:...|.
E. coli   238 -----GMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAE----------TELQAMGPLCSREK 287

  Fly   338 QVMILFIFMVVMYFTRKPGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGP 402
            :::.|.:..:|::      ||.|  |.:::     :|....||.:..:|                
E. coli   288 RMLGLMVGALVLW------IFGG--DYIDA-----AMVGYSVVALMLLL---------------- 323

  Fly   403 VPTGPTPSLITW-KFIQTKVPWGLVFLLGGGFALAEGSKQSG----MAKLIGNALIGLKVLPNSV 462
                   .:|:| ..:..|..|.:.|.|.....||.|...:|    ..||:..:|.|..  |..|
E. coli   324 -------RIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYS--PTMV 379

  Fly   463 LLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEIHPL-YLILPAGLACSMAFHL-PVSTPP 525
            ::.::::..:....|:|..|..:.:.|::...:||:...|| ...|..|.|..:...| |.:|.|
E. coli   380 MVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGP 444

  Fly   526 NALVAGYANIRTKDM----AIAGIGPTIITIITLFVFCQTWGLVVYP 568
            :.:..|...:.|.|.    ||.|:...::.:||        ||:..|
E. coli   445 SPIYYGSGYLPTADYWRLGAIFGLIFLVLLVIT--------GLLWMP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 CitT 120..545 CDD:440239 91/441 (21%)
ttdTNP_417535.1 Na_sulph_symp 4..487 CDD:279307 116/567 (20%)

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