DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy and TDT

DIOPT Version :10

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_199567.1 Gene:TDT / 834806 AraportID:AT5G47560 Length:540 Species:Arabidopsis thaliana


Alignment Length:552 Identity:161/552 - (29%)
Similarity:261/552 - (47%) Gaps:81/552 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KGLVVFLVPLLCLPVMLL-----NEGAEFRCMYLLLV-MAIFWVTEALPLYVTSMIPIVAFPIMG 100
            |...:.|.||||..|.|.     :|....|.|..:|| |..:|:|||:|:.:|||.|:..||:.|
plant    44 KNCYIALGPLLCAVVCLCVDLGGDETTTARNMLGVLVWMFAWWLTEAVPMPITSMTPLFLFPLFG 108

  Fly   101 IMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSPRR---LHFGLIMVTM 162
            |.::|.....|..|.:.:.:|..::|||||:.|:|:||||.:..:....|..   |..|:...|.
plant   109 ISAADDVANSYMDDVISLVLGSFILALAVEHYNIHRRLALNITLVFCVEPLNAPLLLLGICATTA 173

  Fly   163 FLSMWISNAACTAMMCPIIQAVLEELQAQGVCKINHEPQYQIVGGNKKNNEDEPPYPTKITLCYY 227
            |:|||:.|.|...||.|:...:|:.|.:                 :....|...|...|.:....
plant   174 FVSMWMHNVAAAVMMMPVATGILQRLPS-----------------SSSTTEVVHPAVGKFSRAVV 221

  Fly   228 LGIAYASSLGGCGTIIGTATNLTFKGIYEARFKNSTEQMDFPTFMFYSVPSMLVYTLLTFVFLQW 292
            ||:.|::::||..|:.||..||...|::::.|..: :.:.|..:.|:..|    ..|..||.|..
plant   222 LGVIYSAAVGGMSTLTGTGVNLILVGMWKSYFPEA-DPISFSQWFFFGFP----LALCIFVVLWC 281

  Fly   293 HFMGLWRPKSKEAQEVQRGREGADVA------KKVIDQRYKDLGPMSIHEIQVMILFIFMVVMYF 351
            ....::.||            ||..|      |..:.:....||||:..|..|:.:|..:||::.
plant   282 VLCVMYCPK------------GAGQALSPYLHKSHLRRELDLLGPMNFAEKMVLAVFGGLVVLWM 334

  Fly   352 TRK-----PG---IFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPT 408
            ||.     ||   ||.|.|.        :...::.:..:.|::|:|       .::|        
plant   335 TRNITDDIPGWGRIFAGRAG--------DGTVSVMMATLLFIIPSN-------IKKG-------- 376

  Fly   409 PSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGLKVLPNSVLLLVVILVAVF 473
            ..|:.|...: |:||.:|.|||.|||:|:|.:.||:|:::...|:.|:..|...:...|.|:|..
plant   377 EKLMDWNKCK-KLPWNIVLLLGAGFAIADGVRTSGLAEVLSKGLVFLETAPYWAIAPTVCLIAAT 440

  Fly   474 LTAFSSNVAIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLPVSTPPNALVAGYANIRTK 538
            :|.|:||.|...:::|:|.|::..:.||||.|::|..:....||.||..||.|.:.....:|..|
plant   441 ITEFTSNNATTTLLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIK 505

  Fly   539 DMAIAGIGPTIITIITLFVFCQTWGLVVYPNL 570
            ||...|:...|...|.|.:...|.|..|:.::
plant   506 DMIKTGLPLKIAGTIFLSILMPTLGAYVFASM 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 CitT 120..545 CDD:440239 124/441 (28%)
TDTNP_199567.1 CitT 128..529 CDD:440239 128/458 (28%)

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