DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and SLC13A1

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_011514817.1 Gene:SLC13A1 / 6561 HGNCID:10916 Length:651 Species:Homo sapiens


Alignment Length:654 Identity:207/654 - (31%)
Similarity:331/654 - (50%) Gaps:129/654 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VVFLV-PLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQTC 108
            |||.| .||.||::|..:.||  |.|.|.|:|.||:||||||.||:::|.:..|:.|||.|.:..
Human    16 VVFTVLVLLPLPIVLHTKEAE--CAYTLFVVATFWLTEALPLSVTALLPSLMLPMFGIMPSKKVA 78

  Fly   109 RLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAAC 173
            ..||||..::.:|.|.:|.::|..|||||:||:::.:||.:|..|..|.:..|.|||||:||.:.
Human    79 SAYFKDFHLLLIGVICLATSIEKWNLHKRIALKMVMMVGVNPAWLTLGFMSSTAFLSMWLSNTST 143

  Fly   174 TAMMCPIIQAVLE-------ELQAQGVCKINHEPQY-----QIVGGNKKNNEDEPPYPT------ 220
            .||:.||.:||::       |::|..:...|....:     :.|.|::.|...|...|.      
Human   144 AAMVMPIAEAVVQQIINAEAEVEATQMTYFNGSTNHGLEIDESVNGHEINERKEKTKPVPGYNND 208

  Fly   221 --------------------------------KITLCYYLG------------------------ 229
                                            |:.|.|.|.                        
Human   209 TGKISSKVELEKEEEESNQQRVFTGSWVRKRMKLLLAYTLESHLLNKTLTFGLVIPQVKPFQDVP 273

  Fly   230 --------------------------IAYASSLGGCGTIIGTATNLTFKGIYEARFKNSTEQMDF 268
                                      |||:|::||..||.||:|||.|...:..|:.: ...::|
Human   274 LSKNSGMRTKYRTKKGHVTRKLTCLCIAYSSTIGGLTTITGTSTNLIFAEYFNTRYPD-CRCLNF 337

  Fly   269 PTFMFYSVPSMLVYTLLTFVFLQWHFMG-----LWR-PKSKEAQEVQRGREGADVAKKVIDQRYK 327
            .::..:|.|:.|:..||::::|||.|:|     ::: .|:|..|:        ....:||.|.|:
Human   338 GSWFTFSFPAALIILLLSWIWLQWLFLGFNFKEMFKCGKTKTVQQ--------KACAEVIKQEYQ 394

  Fly   328 DLGPMSIHEIQVMILFIFMVVMYFTRKPGIFLGWADLLNSKD--IRNSMPTIFVVVMCFMLPANY 390
            .|||:...||..::|||.|.:::|:|.||...||:.|.:...  ..:|...:.:.::.|::||. 
Human   395 KLGPIRYQEIVTLVLFIIMALLWFSRDPGFVPGWSALFSEYPGFATDSTVALLIGLLFFLIPAK- 458

  Fly   391 AFLRYCTRRGGPVPTGPTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGL 455
             .|...|..|..|....:| |||||..|:.:||.:..|:|||||||:|.::||::|.|||.|..|
Human   459 -TLTKTTPTGEIVAFDYSP-LITWKEFQSFMPWDIAILVGGGFALADGCEESGLSKWIGNKLSPL 521

  Fly   456 KVLPNSVLLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLP 520
            ..||..:::|:..|:...||..:||.|...:.:|:|:.::.||.::|||:::|:.|..|.||.||
Human   522 GSLPAWLIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLP 586

  Fly   521 VSTPPNALVAGYANIRTKDMAIAGIGPTIITIITLFVFCQTWGLVVYPNLNSFPEWAQIYAAAAL 585
            |:.||||:|..|.:::..||..||:|..|:.:..:.:...|| :|...:|.::|.|     |.|:
Human   587 VANPPNAIVFSYGHLKVIDMVKAGLGVNIVGVAVVMLGICTW-IVPMFDLYTYPSW-----APAM 645

  Fly   586 GNKT 589
            .|:|
Human   646 SNET 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 182/584 (31%)
dass 70..545 CDD:273267 181/582 (31%)
SLC13A1XP_011514817.1 SLC13_permease 41..625 CDD:238535 184/595 (31%)
CitT 48..633 CDD:223547 183/597 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146941
Domainoid 1 1.000 373 1.000 Domainoid score I892
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I2041
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 1 1.010 - - D282824at33208
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm8490
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.870

Return to query results.
Submit another query.