DRSC/TRiP Functional Genomics Resources

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Protein Alignment Indy and Slc13a1

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_062354.2 Gene:Slc13a1 / 55961 MGIID:1859937 Length:594 Species:Mus musculus


Alignment Length:589 Identity:202/589 - (34%)
Similarity:326/589 - (55%) Gaps:73/589 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LVVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQTC 108
            ||||.: |:.||:.|:....|.:|.|:|.|:||||:||||||.:|:::|.:.||:.|||.|.|..
Mouse    15 LVVFTI-LVFLPLPLIIRTKEAQCAYILFVIAIFWITEALPLSITALLPGLMFPMFGIMRSSQVA 78

  Fly   109 RLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAAC 173
            ..||||..::.:|.|.:|.::|..|||||:|||::.:||.:|..|..|.:..|.|||||:||.:.
Mouse    79 SAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMVGVNPAWLTLGFMSSTAFLSMWLSNTST 143

  Fly   174 TAMMCPIIQAVLE-------ELQAQGVCKINHEPQY-----QIVGGNKKNNEDEPPYPT------ 220
            .||:.||::||.:       |.:|..:...|....:     :.|.|.:.|.:.|...|.      
Mouse   144 AAMVMPIVEAVAQQIISAEAEAEATQMTYFNESAAHGLDIDETVIGQETNEKKEKTKPAPGSSHD 208

  Fly   221 --KIT--------------------------LCYYLGIAYASSLGGCGTIIGTATNLTFKGIYEA 257
              |::                          :|  |.:||:|::||..||.||:|||.|...:..
Mouse   209 KGKVSRKMETEKNAVTGAKYRSRKDHMMCKLMC--LSVAYSSTIGGLTTITGTSTNLIFSEHFNT 271

  Fly   258 RFKNSTEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMG----LWR-PKSKEAQEVQRGREGADV 317
            |:.: ...::|.::..:|.|..|:..||::::|||.::|    ::: .|:|..:|        ..
Mouse   272 RYPD-CRCLNFGSWFLFSFPVALILLLLSWIWLQWLYLGFDFKMFKCGKTKTLKE--------KA 327

  Fly   318 AKKVIDQRYKDLGPMSIHEIQVMILFIFMVVMYFTRKPGIFLGWADLLNSKD--IRNSMPTIFVV 380
            ..|||.|.|:.||||...||..:::||.|.:::|:|.||...||:.|.:...  :.:|...:...
Mouse   328 CAKVIKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRDPGFVTGWSVLFSEYPGYVTDSTVALVAG 392

  Fly   381 VMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMA 445
            ::.|::||..  :...|..|..:....|| |||||..|:.:||.:..|:|||||||:|.:.||::
Mouse   393 ILFFLIPAKK--VTKMTSAGEIIAFDYTP-LITWKEFQSFMPWDIAILVGGGFALADGCQVSGLS 454

  Fly   446 KLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEIHPLYLILPAG 510
            ..||:.|..|..||..:::|:..|:...||..:||.|...|:.|:|:.::.||:::||.::||:.
Mouse   455 NWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPST 519

  Fly   511 LACSMAFHLPVSTPPNALVAGYANIRTKDMAIAGIGPTIITIITLFVFCQTWGLVVYP--NLNSF 573
            |..|.||.|||:.||||:|..|.:::..||..||:|..|:.:..:.:...||   :.|  ||:.:
Mouse   520 LCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFTW---IEPMFNLHEY 581

  Fly   574 PEWA 577
            |.||
Mouse   582 PSWA 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 181/529 (34%)
dass 70..545 CDD:273267 180/527 (34%)
Slc13a1NP_062354.2 CitT 13..572 CDD:223547 196/574 (34%)
SLC13_permease 38..566 CDD:238535 184/541 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..226 4/33 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836886
Domainoid 1 1.000 383 1.000 Domainoid score I822
eggNOG 1 0.900 - - E1_COG0471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 392 1.000 Inparanoid score I1967
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 1 1.010 - - D282824at33208
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm8724
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.870

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