DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and CG13801

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_647714.1 Gene:CG13801 / 38299 FlyBaseID:FBgn0035332 Length:690 Species:Drosophila melanogaster


Alignment Length:550 Identity:101/550 - (18%)
Similarity:186/550 - (33%) Gaps:179/550 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 TSMIPIVAFPIMGIMSSDQTCRLYFK----DTLVMFMGGIMVA-----------LAVEYCNLHKR 137
            |.:|..::..::.::.|..|......    :|:::.:|.:::.           |||....:.|.
  Fly   230 TLLITAMSLALLTVLGSRPTLETIVSWVDWETMMLLLGNMIITSRMADTGFFDYLAVVAYRISKG 294

  Fly   138 LALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQGVCKINHEPQY 202
            .|..:|.::|     ...||      .|..:.||....:.||.:..:.|.:.             
  Fly   295 HAWLLIGLLG-----FFVGL------TSTVVDNATVVLLFCPPVIRLCEVMD------------- 335

  Fly   203 QIVGGNKKNNEDEPPYPTKITLCYYLGIAYASSLGGC--------GTIIGTATNLTFKGIYEARF 259
                             .:.||...:...|| ::||.        .|||.|...:...||     
  Fly   336 -----------------LRTTLVLIIVAIYA-NIGGSITPVSGPPNTIIATNKMVESAGI----- 377

  Fly   260 KNSTEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMG--LWRPKSKEAQEVQRGREGA----DVA 318
                   :|..|....:|:.|:....||..:.| .||  ::.....:....::.||..    |:.
  Fly   378 -------NFVRFSLLMLPTALICLASTFGLIYW-TMGKKIYILDEDQVNLAEKRRENTRTSFDIQ 434

  Fly   319 KKVID----QRYKDLGPMSIHEIQVMIL-----------------------FIFMVVMYFTRKPG 356
            .:|.:    .|.|.:.|...:.|.:..|                       |.|::.......||
  Fly   435 LRVAELRRQPRSKVIPPAESYFITLATLEASNFVRKKVLLVESLLALSFAAFCFILQSVPWAIPG 499

  Fly   357 IFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFI---Q 418
            ..|||..:|::          |::::                            ||..|.|   .
  Fly   500 ASLGWISILSA----------FLLLI----------------------------LIDQKDIIKVM 526

  Fly   419 TKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIG--LKV---LPNSVLLLVVILVAVFLTAFS 478
            ..|.||::.||...|.......:.|:...:|:.::.  |:|   ....|.:|:::.::..|:||.
  Fly   527 ASVEWGIMLLLASLFIFTMVVDELGLIHWLGSQVVSVILRVDESYQTMVGMLLILWLSALLSAFI 591

  Fly   479 SNVAIANIIIPVLAEMSLAIEIH-PLYLILPAGLACSMAFHLPVSTPPN-----------ALVAG 531
            .|.|:|.|::.:..:|.:..::. ||   ||...|.||.    .|...|           |.|.|
  Fly   592 HNAAVAPIMVKLCTDMVVYDQVQMPL---LPLIWATSMG----TSYGANGTLLGSLANEFAAVVG 649

  Fly   532 YAN---IRTKDMAIAGIGPTIITIITLFVF 558
            .|:   |..:...:.|....:.|::...:|
  Fly   650 KAHGYKITFRSFFVVGFLIMLFTVVICSIF 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 98/535 (18%)
dass 70..545 CDD:273267 98/535 (18%)
CG13801NP_647714.1 ArsB 208..682 CDD:223983 100/549 (18%)
P_permease 212..681 CDD:238536 100/549 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448706
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.