DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and hoe2

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_608878.1 Gene:hoe2 / 33700 FlyBaseID:FBgn0031649 Length:846 Species:Drosophila melanogaster


Alignment Length:611 Identity:103/611 - (16%)
Similarity:218/611 - (35%) Gaps:169/611 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KCSNFFANHWKGLVVFLVPLLCLPVMLLN-------EGAEFRCMYLLLVMAIFWVT-EALPLYVT 88
            |.|.|..:.:..:.|.|..:|....:::|       .|......|.|||..:|..| .|:...:.
  Fly   310 KNSEFRLHIYSDVEVDLAIVLNYNPLIVNARTGSILAGVILLIFYALLVWELFERTFVAMICSIL 374

  Fly    89 SMIPIVAF---PIMGIMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSP 150
            |:..:..|   |.|     |:..:....:.|.:....:::.|.:....:...||:...:|.|...
  Fly   375 SVTTLACFNDRPNM-----DEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGKI 434

  Fly   151 RRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQGVCKINHEPQYQIVGGNKKNNEDE 215
            ..:.:.|.:||..:|..:.|.....::.|:...:.|.:|..                        
  Fly   435 WPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLD------------------------ 475

  Fly   216 PPYPTKITLCYYLGIAYASSLGGCGTIIGTATNLTFKGIYEARFKNSTEQMDFPTFMFYSVPSML 280
             |.|.      .:||...:::||..|.||...::    |...........:.||||:.::.|.::
  Fly   476 -PLPV------VMGIIVHANIGGALTPIGDPISI----IVSTNHFIVDNDVTFPTFVAHTFPGVI 529

  Fly   281 VYTLLTFVFLQWHF--------------------MGLWRPK-------SKEAQEVQRGREGADV- 317
            :..:.:.|:|:..:                    |.:|:..       ||:||.| ||...|.: 
  Fly   530 LAVIQSCVYLRLFYHNIDALRLNEPKEMSELRREMKVWQRALNAVASCSKDAQLV-RGTLQAKIK 593

  Fly   318 -AKKVIDQRYKDLGPMSIHE------------------IQVMILFIFMVVMYFTRK-------PG 356
             .|:.:.:..|.:|...::.                  :|.....:|::|.:|.:.       | 
  Fly   594 QLKRTLRRLQKGVGSTEVYTNTLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHWRTLP- 657

  Fly   357 IFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKV 421
              |||..||.            |:::..:|..:                       ..:.:..::
  Fly   658 --LGWVALLG------------VILLLIILNRD-----------------------DMEHLMHRI 685

  Fly   422 PWGLVFLLGGGFALAEGSKQSG----MAKLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNV- 481
            .|..:......|.:.|..::.|    :::|..:.::.   :..|..|.:.|.:.::::|.:|:: 
  Fly   686 EWTTLLFFAAMFVMMECVERLGIFACISELTEHVILS---VGKSHRLAMAIFMILWMSALASSIL 747

  Fly   482 -------AIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLPV-STPPNALVAGYANIRTK 538
                   .:..::..::|:.||.:.:.||...|..|  .||..:..: ....|.:.||.|.....
  Fly   748 DSIPVAAIMVKLVTSLVAKPSLGLPLQPLVWALTLG--ASMGGNGTLYGASANVIAAGIAEQHGY 810

  Fly   539 DMAIAGIGPTI-------ITIITLFV 557
            .::......|:       ||::|:::
  Fly   811 KLSFTRYLRTVFPMMLGQITLMTVYL 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 91/547 (17%)
dass 70..545 CDD:273267 90/545 (17%)
hoe2NP_608878.1 ArsB 343..837 CDD:223983 96/578 (17%)
P_permease 350..837 CDD:238536 95/571 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448710
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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