DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and hoe1

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001285607.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster


Alignment Length:594 Identity:105/594 - (17%)
Similarity:207/594 - (34%) Gaps:188/594 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DIKMEIEIGEQPQPPVKCSNFFANHWKGLVVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVT 80
            ::.:::.:.|.|           .:.:..|::...:||             .:|::::..|...|
  Fly   324 ELPLQLNVDESP-----------IYKRDGVIYAAAVLC-------------GLYVMIIWEIVNRT 364

  Fly    81 EALPLYVTSMIPIVA--------FPIMGIMSSDQTCRLYFKDTLVMFMG--GIMVALAV---EYC 132
            .|..:..|..:.|:|        ..|||.:..:....|:....||..:.  |:...|||   :..
  Fly   365 FAAIIASTLSVGILAALNSRPSMATIMGWIDVETLLLLFGMMILVAILSETGVFDYLAVYAYKIT 429

  Fly   133 NLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQGVCKIN 197
            |.|      |..::.|        |.:.|..||.::.|.....:|.|:...:.|      |..:|
  Fly   430 NGH------VWPLINC--------LCLFTAVLSSFLDNVTTVLLMTPVTIRLCE------VMCLN 474

  Fly   198 HEPQYQIVGGNKKNNEDEPPYPTKITLCYYLGIAYASSLGGCGTIIGTATNLTFKGIYEARFKNS 262
                                 |..|.:|.   :.| |::||..|.:|...|:    |..:....|
  Fly   475 ---------------------PVPILMCM---VIY-SNIGGALTPVGDPPNV----IIASNSYIS 510

  Fly   263 TEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMGLWRPKSKEAQEVQRGREGADVAKKV---IDQ 324
            ...::|..|..:.:|.:|:..:.|::.|::.|..:...:.|::.||:..|....|.|:.   :..
  Fly   511 KNGVNFAVFTLHMLPGVLLVMVQTYIQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSA 575

  Fly   325 RYKD--------------------------LGPMSIHE------------------IQVMILFIF 345
            ..||                          :.|...::                  |:.....:|
  Fly   576 YSKDEELVRQTLMKKVNRLKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVF 640

  Fly   346 MVVMYFTRK----PGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTG 406
            ::.::|...    ..:.|||..||.:         ||::::.                       
  Fly   641 VISLFFLHSVPELQRLSLGWTALLGA---------IFLIILA----------------------- 673

  Fly   407 PTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGL--------KVLPNSVL 463
               .:...:.|..:|.|..:......|.|.|...:.|:.:.|||...|:        :::   |.
  Fly   674 ---DIEDMEAILARVEWSTLLFFAALFILMEALTELGLIEWIGNMTEGIILGVGEDRRLM---VA 732

  Fly   464 LLVVILVAVFLTAFSSNVAIANIIIPV---LAEMS-LAIEIHPLYLILPAGLACSMAFHLPVSTP 524
            :|:::.|:...:||..|:.:..:::.:   ||:.| |.:.:.||...|..| ||.......:...
  Fly   733 ILIILWVSAVASAFVDNIPLTTMMVKITISLAQNSTLNLPLQPLVWALALG-ACLGGNGTLIGAS 796

  Fly   525 PNALVAGYA 533
            .|.:.||.|
  Fly   797 ANVVCAGVA 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 100/542 (18%)
dass 70..545 CDD:273267 99/540 (18%)
hoe1NP_001285607.1 ArsB 345..839 CDD:223983 102/562 (18%)
P_permease 349..837 CDD:238536 102/558 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448698
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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