DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and nac-3

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001022673.1 Gene:nac-3 / 176429 WormBaseID:WBGene00003519 Length:566 Species:Caenorhabditis elegans


Alignment Length:551 Identity:186/551 - (33%)
Similarity:293/551 - (53%) Gaps:59/551 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GLVVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPIMGIMSSDQT 107
            |||:.|.||. ...||..||.|::|.|.:.::|::|::|.:||.||:|:|:|.||::|::.::.|
 Worm    54 GLVLVLTPLF-FGQMLNWEGPEWKCAYCVCIIAVYWMSEVMPLAVTAMLPVVLFPLVGVLDANTT 117

  Fly   108 CRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAA 172
            .:.|..||..:|:||:::|.|||.|:||:|:||.|::.||..|:.:..|.:.||..||.:|||.|
 Worm   118 AKEYMNDTNFLFIGGLIMAAAVEKCDLHERVALSVLRCVGSEPKWIMLGFMTVTALLSSFISNTA 182

  Fly   173 CTAMMCPIIQAVLEELQAQGVCKINHEPQYQIVGGNKKNNEDEPPYPTKITLCYYLGIAYASSLG 237
            .||||.||.|:|:::|    :....|.|         .|.|.......|:.....|.|.:|:::|
 Worm   183 TTAMMVPIGQSVVQQL----ISSFQHHP---------TNGERGRLGCKKMATGLVLSICFAANIG 234

  Fly   238 GCGTIIGTATNLTFKGIYEARFKNSTEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMGLWRPKS 302
            |.||..||.:||...|...|.|......:::.|::|::.|.||:...:.::.|...|:       
 Worm   235 GTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLLCLFVAWMTLVSFFL------- 292

  Fly   303 KEAQEVQRGREGADVAKKVIDQRYKDLGPMSIHEIQVMILFIFMVVMYFTRKPGIFLGWADLLNS 367
            ::|.|..      :...:::..||.:|..|:..|..|.:.|..::.::..|.||:..|:......
 Worm   293 RDAPEKD------EAVTEMLKTRYNELPRMTYAEKSVFVCFCILLSLWVFRNPGVVPGFGVFFKK 351

  Fly   368 KDIRNSMPTIFVVVMCFMLP------ANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKVPWGLV 426
            ....::...:.|..:.|:||      |.|.......:||         .|:.||.:|...||.:|
 Worm   352 GAYTDATSAMIVAFLLFVLPSERPDLATYIKKEDLKKRG---------CLMDWKTMQETFPWSVV 407

  Fly   427 FLLGGGFALAEGSKQSGMAKLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNVAIANIIIPVL 491
            .|||||||||.|.|:||::.||||:|..::.||..:|.|:.:|:|:.:|...||...|:|.:|::
 Worm   408 LLLGGGFALAAGVKESGLSLLIGNSLSSIEHLPLWILQLLTMLIAMVITNICSNTVTASIFVPIV 472

  Fly   492 AEMSLAIEIHPLYLILPAGLACSMAFHLPVSTPPNALVAGYANIRTKDMAIAGIGPTIITIITLF 556
            |.::.....||..|:||..||.|.||..||.|||||:|.|...::..|||..|      .||:|.
 Worm   473 ATLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNAIVFGSGMVKVSDMAFVG------GIISLE 531

  Fly   557 VFCQTWGLVVYPN--------LNSFPEWAQI 579
            :...|   |:|.|        |..||.||.|
 Worm   532 LLVLT---VLYMNSIAYLTLPLLEFPTWAII 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 160/482 (33%)
dass 70..545 CDD:273267 159/480 (33%)
nac-3NP_001022673.1 SLC13_permease 83..543 CDD:238535 167/503 (33%)
dass 84..539 CDD:273267 165/498 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 316 1.000 Domainoid score I685
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2965
Inparanoid 1 1.050 329 1.000 Inparanoid score I1442
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57284
OrthoDB 1 1.010 - - D282824at33208
OrthoFinder 1 1.000 - - FOG0000298
OrthoInspector 1 1.000 - - mtm4842
orthoMCL 1 0.900 - - OOG6_101290
Panther 1 1.100 - - O PTHR10283
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2228
SonicParanoid 1 1.000 - - X273
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.010

Return to query results.
Submit another query.