DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Indy and slc13a4

DIOPT Version :9

Sequence 1:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_031753973.1 Gene:slc13a4 / 100495139 XenbaseID:XB-GENE-22062682 Length:603 Species:Xenopus tropicalis


Alignment Length:609 Identity:203/609 - (33%)
Similarity:341/609 - (55%) Gaps:72/609 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 WKG-------LVVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVTEALPLYVTSMIPIVAFPI 98
            |||       |:..|||||.||:.||:..:|..|.|:|:|.|::||:||:||...:::|...||:
 Frog     4 WKGLLRSKNLLLAILVPLLLLPLPLLHPSSESSCAYVLIVTAVYWVSEAVPLGAAALVPAFLFPL 68

  Fly    99 MGIMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSPRRLHFGLIMVTMF 163
            .|::.|.:....|.|:|.::.||.|.:|.:||..|||||:|||::.:.|..|.||....:..|..
 Frog    69 FGVLKSSEVAGEYVKNTTLLLMGVICLAASVEKWNLHKRIALRMVMLSGAKPGRLLLCFMSCTAL 133

  Fly   164 LSMWISNAACTAMMCPIIQAVLEEL---------------------QAQGVCKINHE-------- 199
            ||||:||.:.|||:.||::|||::|                     |.:|..::..:        
 Frog   134 LSMWLSNTSSTAMVMPIVEAVLQQLITTEEEHEGIVPSGTSATESAQQKGKQRLTMQETIATNKQ 198

  Fly   200 --------PQYQIV---GGNKKNNEDEPPYPTK----ITLCYYLGIAYASSLGGCGTIIGTATNL 249
                    ||.||:   ..:.::.:::..|.::    |..|..|.::||:::||..|||||:|:|
 Frog   199 FAPLYCALPQTQILVLPPTDSRDQKEKGRYQSRHDHMICKCLSLSVSYAATIGGLTTIIGTSTSL 263

  Fly   250 TFKGIYEARFKNSTEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMGL-WRPKSKEAQEVQRGRE 313
            .|...::.|:.:: :.:.|.|:..:|||..:::.|:|:|::.|.|:|. ::.....:::.:..||
 Frog   264 IFLEHFKNRYPDA-DVVHFGTWFVFSVPITVIFLLMTWVWMHWLFLGCNFKETCSLSKKAKTKRE 327

  Fly   314 GADVAKKVIDQRYKDLGPMSIHEIQVMILFIFMVVMYFTRKPGIFLGWADLLNSKDIRNSMPTIF 378
              :::::.|.:.|:.||.:|..|...:..||.|.|::|||:||...||......|..|.. .|:.
 Frog   328 --ELSEQRIQEEYEKLGDISYPEKVTVFFFILMTVLWFTREPGFVPGWESFFEKKGFRTD-ATVS 389

  Fly   379 VVV--MCFMLPANY-AFLRYCTRR----GGPVPTGPTPSLITWKFIQTKVPWGLVFLLGGGFALA 436
            |::  :.|::|:.. .||.:..:.    .|....||:.|::||:..|..:||.:|.|:|||:|||
 Frog   390 VLLGFLLFLIPSKKPTFLCFGKKEPGQGDGSDQDGPSGSMLTWQEFQKNMPWEIVVLVGGGYALA 454

  Fly   437 EGSKQSGMAKLIGNALIGLKVLPN-SVLLLVVILVAVFLTAFSSNVAIANIIIPVLAEMSLAIEI 500
            .|.:.||::.|||..:..|..||: :|.||...||:. :|.|.||.|...|.:|:|..:|.|:.|
 Frog   455 AGCRTSGLSTLIGRQMECLSSLPSWAVTLLACALVSA-VTEFVSNPATVTIFLPILCSLSEALHI 518

  Fly   501 HPLYLILPAGLACSMAFHLPVSTPPNALVAGYANIRTKDMAIAGIGPTIITIITLFVFCQTWGLV 565
            :|||.::|..:..|:|..|||..||||:|..|.:...:||..||:|..:|.:..:.|...|||:.
 Frog   519 NPLYTLIPVTMCISLAVMLPVGNPPNAIVYNYGHCHIRDMVKAGLGVNLIGLAIIMVAINTWGIS 583

  Fly   566 VYPNLNSFPEWAQIYAAAALGNKT 589
            :: .|::||:||::      ||.|
 Frog   584 LF-QLDTFPDWAKV------GNAT 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 173/529 (33%)
dass 70..545 CDD:273267 172/527 (33%)
slc13a4XP_031753973.1 SLC13_permease 38..581 CDD:238535 178/547 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282824at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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