Protein Alignment ftz-f1 and nr6a1

DIOPT Version :9

• Sequence 1: NP_524143.2
• Gene: ftz-f1 / 40045
• FlyBaseID: FBgn0001078
• Length: 1027
• Species: Drosophila melanogaster
• Sequence 2: XP_012823721.1
• Gene: nr6a1 / 493367
• XenbaseID: XB-GENE-487592
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 557
• Identity: 137/557 - (24%)
• Similarity: 222/557 - (39%)
• Gaps: 149/557 - (26%)

  Fly   472 GGAGGNSGPG---NPMGGTSATPGHGGEVID--FK-------HLFEELCPVCGDKVSGYHYGLLT 524
            |.:|....||   .|.|....|.|:..::..  ||       .:.:..|.:|||:.:|.|||:::
 Frog     6 GASGLMDSPGFYKEPAGENEHTAGNMSDLSSDGFKMNSLVDDRVDQRACLICGDRATGLHYGIIS 70

  Fly   525 CESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNK 589
            ||.|||||||::.||:||.|..:::|.:.:.||.||.|||..|||::||..:|:|.|.|.|||||
 Frog    71 CEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNK 135

  Fly   590 FGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLT 654
                                        |:||                 :.|..| :|.::
 Frog   136 ----------------------------SIGP-----------------VQISDE-EIERI---- 150

  Fly   655 QSPDSSPSPIAIALGQVNASTGGVIATPMNAGTGGSGGGGLNGPSSVGNGNSSNGSSNGNNNSST 719
                                                    ::|.......|:|..::..:::||.
 Frog   151 ----------------------------------------MSGQEFEEEANTSWSNNGDSDHSSP 175

  Fly   720 GNGTSGGGGGNNAGGGGGGTNSNDGLHRNGGNGNSSCHEAGIGSLQNTADSKL------------ 772
            |||.|               .||.....:..:.:.|....|.|||:   |..|
 Frog   176 GNGVS---------------ESNQPSPVSTPSSSRSMELNGFGSLR---DQYLGTPGPMHYQYLP 222

  Fly   773 -CFDSGTHPS--STADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMC 834
             .|....||:  .|....::| :...:|.:.:.:.|.....|   .:|.:..|...:.:||.|:|
 Frog   223 HLFSYSAHPTLIPTQSRSLDP-QSHTLINQLLTAEDIEPLST---PMLIEDGYKVTQSELFALLC 283

  Fly   835 KVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHL---HHRIHNGLPDETQL--- 893
            ::.|:.||.|:.|.:...||.||.:.|...||..:|.::::|..|   ..:|...|.|.|..
 Frog   284 RLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSP 348

  Fly   894 NNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPSVRGIVNRKTVSEG 958
            :..::......|:..:.:|...|    .|...||....:|||||.:..||..::||.:...|.:.
 Frog   349 SEDELHRFSEDGMEVMERLIYLF----RKFSQLKVSNEEYVCMKAINFLNQDIQGISSVSQVEQL 409

  Fly   959 HDNVQAALLDYTLTCYPSVNDKFRGLVNILPEIHAMA 995
            :........|:|...||...::|..|:..|||:..:|
 Frog   410 NKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIA 446

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz-f1	NP_524143.2	NR_DBD_Lrh-1_like	508..600	CDD:143541	44/91 (48%)
		NR_LBD_Ftz-F1_like	794..1024	CDD:132742	54/208 (26%)
nr6a1	XP_012823721.1	NR_DBD_GCNF_like	46..135	CDD:143543	42/88 (48%)
		NR_LBD_DHR4_like	251..463	CDD:132751	53/203 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278717at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920