Protein Alignment ftz-f1 and Nr6a1

DIOPT Version :9

• Sequence 1: NP_524143.2
• Gene: ftz-f1 / 40045
• FlyBaseID: FBgn0001078
• Length: 1027
• Species: Drosophila melanogaster
• Sequence 2: XP_017447631.2
• Gene: Nr6a1 / 362125
• RGDID: 1564740
• Length: 495
• Species: Rattus norvegicus
• Alignment Length: 611
• Identity: 145/611 - (23%)
• Similarity: 235/611 - (38%)
• Gaps: 179/611 - (29%)

  Fly   411 SGGGGGGGGGNLLNGSSGGSSAGGGYMLLPQAASSSGNNG--NPNAGHMSSGSVGNGSGGAGNGG 473
            ||||||||              ..|::..|.|......||  ......:..|:         ||.
  Rat     9 SGGGGGGG--------------SAGFLEPPAALPPPPRNGFCQDELAELDPGT---------NGE 50

  Fly   474 AGG-NSGPGN-PMGGTSATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 536
            ..| ..|.|: |:    :.|....|        :..|.:|||:.:|.|||:::||.|||||||::
  Rat    51 TDGLTLGQGHIPV----SVPDDRAE--------QRTCLICGDRATGLHYGIISCEGCKGFFKRSI 103

  Fly   537 QNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARK 601
            .||:||.|..:::|.:.:.||.||.|||..|||::||..:|:|.|.|.|||||
  Rat   104 CNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNK------------ 156

  Fly   602 LQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAI 666
                            |:||                 :.|.:| :|.::.|..:..:.:
  Rat   157 ----------------SIGP-----------------VQISEE-EIERIMSGQEFEEEA------ 181

  Fly   667 ALGQVNASTGGVIATPMNAGTGGSGGGGLNGPSSVGNGNSSNGSSNGNNNSSTGNGTSGGGGGNN 731
                                                |..|::|.|   ::||.||..|    .:|
  Rat   182 ------------------------------------NHWSNHGDS---DHSSPGNRVS----ESN 203

  Fly   732 AGGGGGGTNSNDGLHRNGGNGNSSCHEAGIGSLQNTADSKLCFDSGTH----PSSTADALIEPLR 792
            ....|...:|:..:..||              .....|..:......|    |.     |.....
  Rat   204 QPSPGSTLSSSRSVELNG--------------FMTFRDQYMGMSVPPHYQYIPH-----LFSYSG 249

  Fly   793 VSPMIREFVQSIDDREWQT--QLFA----------LLQKQTYNQVEVDLFELMCKVLDQNLFSQV 845
            .||::....:|:|.:.:..  ||.:          :|.:..|...:.:||.|:|::.|:.||.|:
  Rat   250 HSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQI 314

  Fly   846 DWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHL---HHRIHNGLPDET---QLNNGQVFNLMSL 904
            .|.:...||.:|.:.|...||..:|.::::|..|   ..:|...|.|.|   ..::.::......
  Rat   315 AWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDE 379

  Fly   905 GLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPSVRGIVNRKTVSEGHDNVQAALLDY 969
            |:..:.:|    ..|.:|...||....:|.|||.:..||..:||:.:...:.:.:........|:
  Rat   380 GMEVIERL----IYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLSSASQLEQLNKRYWYICQDF 440

  Fly   970 TLTCYPSVNDKFRGLVNILPEIHAMA 995
            |...|....::|..|:..||||..:|
  Rat   441 TEYKYTHQPNRFPDLMMCLPEIRYIA 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz-f1	NP_524143.2	NR_DBD_Lrh-1_like	508..600	CDD:143541	44/91 (48%)
		NR_LBD_Ftz-F1_like	794..1024	CDD:132742	54/220 (25%)
Nr6a1	XP_017447631.2	NR_DBD_GCNF_like	67..156	CDD:143543	43/96 (45%)
		NR_LBD_DHR4_like	271..482	CDD:132751	50/200 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278717at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920