Protein Alignment ftz-f1 and Hr4

DIOPT Version :9

• Sequence 1: NP_524143.2
• Gene: ftz-f1 / 40045
• FlyBaseID: FBgn0001078
• Length: 1027
• Species: Drosophila melanogaster
• Sequence 2: NP_001259161.1
• Gene: Hr4 / 31162
• FlyBaseID: FBgn0264562
• Length: 2123
• Species: Drosophila melanogaster
• Alignment Length: 1263
• Identity: 282/1263 - (22%)
• Similarity: 412/1263 - (32%)
• Gaps: 479/1263 - (37%)

  Fly    12 SSNTNYATEATSNH-HHL--QHQHQQQHSHQQQQQQQLLMPH------------------HHKDQ 55
            |.:..:.|:..:.| |||  |.|.|||.||.||||||...||                  ||:.|
  Fly   486 SQSMQHLTQQQAIHLHHLLGQQQQQQQASHPQQQQQQQHSPHSLVRVKKEPNVGQRHLSPHHQQQ 550

  Fly    56 MLAAGSSPMLPFYSHLQLQQKDATATI------------GPAAAAAAVEAATTSANADNFSSLQT 108
                  ||:|..:...|.||:.....:            .|.|.|....|:....|::..:::..
  Fly   551 ------SPLLQHHQQQQQQQQQQQQHLHQQQQQQQHHQQQPQALALMHPASLALRNSNRDAAILF 609

  Fly   109 IDASQLDGGISLSGLCDRFFVASPNPHSNSNMTLMGTATAATTTTTNNNNNNNTNNNNNNNVEAK 173
            ...|::...:: :||          ||.   |...|.|.||.
  Fly   610 RVKSEVHQQVA-AGL----------PHL---MQSAGGAAAAA----------------------- 637

  Fly   174 TVRPSNGNSVIIESVTMPSFANILFPTHRSANECIDPALLQKNPQNPNGNNSSIIVPPVEYHQLK 238
                    :..:.:..|..|:|...                      ||....:|..|:  ..|:
  Fly   638 --------AAAVAAQRMVCFSNARI----------------------NGVKPEVIGGPL--GNLR 670

  Fly   239 PLEVNSSTSVSTSNFLSSTTAQLLDFEVQVGKDDGHISTTTTTGPGSGSASGSGSGSGS------ 297
            |:.|                                               |.|:||||
  Fly   671 PVGV-----------------------------------------------GGGNGSGSVQCPSP 688

  Fly   298 --GSGSIARTIGTATPTTTTSMSNTANPTRSSLHSIEELAASSCA------------PRAASPNS 348
              .|.|.:..:...||:.|..   ...||        .:...||.            |.|...:.
  Fly   689 HPSSSSSSSQLSPQTPSQTPP---RGTPT--------VIMGESCGVRTMVWGYEPPPPSAGQSHG 742

  Fly   349 NHTSSASTTPQQQQQQQHHMQSGNHSGSNLSSDDESMSEDEFGLEIDDNGGYQDTTSS------- 406
            .|       ||||||..||............|..:...:.:..|     |..|...||
  Fly   743 QH-------PQQQQQSPHHQPQQQQQQQQQQSQQQQQQQQQQSL-----GQQQHCLSSPSAGSLT 795

  Fly   407 HSQQSGGG---GGGGGGNLLNGS--------------SGGSSA---------------------- 432
            .|..||||   |||.||.|...|              |.|.:.
  Fly   796 PSSSSGGGSVSGGGVGGPLTPSSVAPQNNEEAAQLLLSLGQTRIQDMRSRPHPFRTPHALNMERL 860

  Fly   433 -GGGYMLLP----QAASSSGNNGNPNAGHMSSGSVGNGSGGAGNGGAGGNSGPGNPMGGTSATPG 492
             .|.|..||    ||.       |.:|.....||    |...|.||.||.      |||.:....
  Fly   861 WAGDYSQLPPGQLQAL-------NLSAQQQQWGS----SNSTGLGGVGGG------MGGRNLEAP 908

  Fly   493 HGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 557
            |.....|.:.|   :|.:|.||.:|.|||::|||.|||||||||||::||||||:.:|.|.|.||
  Fly   909 HEPTDEDEQPL---VCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQR 970

  Fly   558 KRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMY-----KRDRARKLQVMRQRQLALQALRN 617
            .||.||||:||:|.||.|:|||.|||.||||. |.:|     |..:.:|....:|:|.|.|..:.
  Fly   971 NRCQYCRFKKCIEQGMVLQAVREDRMPGGRNS-GAVYNLYKVKYKKHKKTNQKQQQQAAQQQQQQ 1034

  Fly   618 SMGPDIKP-----------------TPISPGYQQAYPNMNIKQEIQIPQVS-SLTQSPDSSPSPI 664
            :.......                 :|:...:.|.:.:.:.:|: ..||:| ....||.......
  Fly  1035 AAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQGHQSHHAQQQ-HHPQLSPHHLLSPQQQQLAA 1098

  Fly   665 AIALG--------------QVNASTGGVI-----------------ATPMNAGTGGSGGGGLNGP 698
            |:|..              |.....|||:                 |.||::            |
  Fly  1099 AVAAAAQHQQQQQQQQQQQQQAKLMGGVVDMKPMFLGPALKPELLQAPPMHS------------P 1151

  Fly   699 S-------------------SVGNGNSSNGSSNGNNNSSTGNGTSGGGGGNNAGGGG-------G 737
            :                   |:.:.:.......|.:.:   :....||||..||||.       .
  Fly  1152 AQQQQQQQQQQQQQQASPHLSLSSPHQQQQQQQGQHQN---HHQQQGGGGGGAGGGAQLPPHLVN 1213

  Fly   738 GTNSNDGL----------HRNGGNGNSS-----CHEAGIGSLQNTADSKLCFDSGTHPSSTADAL 787
            ||.....|          ||.....:||     .:|..:|.:|...|              .||:
  Fly  1214 GTILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHALGMIQTLID--------------CDAM 1264

  Fly   788 IEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTV 852
             |.:...|...||   ::|:.                   ::.|.:|.:.|..:...|.|.:...
  Fly  1265 -EDIATLPHFSEF---LEDKS-------------------EISEKLCNIGDSIVHKLVSWTKKLP 1306

  Fly   853 FFKDLKVDDQMKLLQHSWSDMLVL-----DHLHHR-------IHNGLPDETQLN----------- 894
            |:.::.|:...|||...|.::|:|     ..||.:       ..:|.|..|.|:
  Fly  1307 FYLEIPVEIHTKLLTDKWHEILILTTAAYQALHGKRRGEGGGSRHGSPASTPLSTPTGTPLSTPI 1371

  Fly   895 ------------------NGQVFNLMS--LGLLGVP-----------QLGDYFNELQNKLQDLKF 928
                              |..:..|.:  ..|:|.|           .:.|...::....:.:|.
  Fly  1372 PSPAQPLHKDDPEFVSEVNSHLSTLQTCLTTLMGQPIAMEQLKLDVGHMVDKMTQITIMFRRIKL 1436

  Fly   929 DMGDYVCMKFLILLNPSVRGIVNRKTVSEGHDNVQAALLDYTLTCYPSVNDKFRGLVNILPEIHA 993
            .|.:|||:|..||||   :..|..:::.|.:..|..:.|..:....|..  :...|::.:|||.|
  Fly  1437 KMEEYVCLKVYILLN---KAEVELESIQERYVQVLRSYLQNSSPQNPQA--RLSELLSHIPEIQA 1496

  Fly   994 MA--VRGEDHLYTKHCAGSAPTQTLLME 1019
            .|  :......|......||..: .::|
  Fly  1497 AASLLLESKMFYVPFVLNSASIRXQMLE 1524

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz-f1	NP_524143.2	NR_DBD_Lrh-1_like	508..600	CDD:143541	58/96 (60%)
		NR_LBD_Ftz-F1_like	794..1024	CDD:132742	54/282 (19%)
Hr4	NP_001259161.1	NR_DBD_DHR4_like	913..1002	CDD:143542	56/91 (62%)
		NR_LBD_DHR4_like	1256..1515	CDD:132751	56/300 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278717at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.920