DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz-f1 and NR6A1

DIOPT Version :9

Sequence 1:NP_524143.2 Gene:ftz-f1 / 40045 FlyBaseID:FBgn0001078 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_201591.2 Gene:NR6A1 / 2649 HGNCID:7985 Length:480 Species:Homo sapiens


Alignment Length:565 Identity:134/565 - (23%)
Similarity:224/565 - (39%) Gaps:160/565 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 AGNGGAGGNSGPGNPMGGTSATPGHG-----------GEV-IDFKHLFEELCPVCGDKVSGYHYG 521
            :|.||.||::|...|.......|.:|           |.: :......:..|.:|||:.:|.|||
Human     9 SGGGGGGGSAGFLEPPAALPPPPRNGFCQDELAELDPGTISVSDDRAEQRTCLICGDRATGLHYG 73

  Fly   522 LLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGG 586
            :::||.|||||||::.||:||.|..:::|.:.:.||.||.|||..|||::||..:|:|.|.|.||
Human    74 IISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGG 138

  Fly   587 RNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVS 651
            |||                            |:||                 :.|.:| :|.::.
Human   139 RNK----------------------------SIGP-----------------VQISEE-EIERIM 157

  Fly   652 SLTQSPDSSPSPIAIALGQVNASTGGVIATPMNAGTGGSGGGGLNGPSSVGNGNSSNGSSNGNNN 716
            |..:..:.:                                          |..|::|.|   ::
Human   158 SGQEFEEEA------------------------------------------NHWSNHGDS---DH 177

  Fly   717 SSTGNGTSGGGGGNNAGGGGGGTNSNDGLHRNGGNG--------NSSCHEAGIGSLQNTADSKLC 773
            ||.||..|    .:|....|...:|:..:..||...        :...|...|..|         
Human   178 SSPGNRAS----ESNQPSPGSTLSSSRSVELNGFMAFREQYMGMSVPPHYQYIPHL--------- 229

  Fly   774 FDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQT--QLFA----------LLQKQTYNQVE 826
            |....|              ||::.:..:|:|.:.:..  ||.:          :|.:..|...:
Human   230 FSYSGH--------------SPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAVTQ 280

  Fly   827 VDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHL---HHRIHNGLP 888
            .:||.|:|::.|:.||.|:.|.:...||.:|.:.|...||..:|.::::|..|   ..:|...|.
Human   281 AELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELA 345

  Fly   889 DET---QLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPSVRGIV 950
            |.|   ..::.::......|:..:.:|    ..|.:|...||....:|.|||.:..||..:||:.
Human   346 DVTAKYSPSDEELHRFSDEGMEVIERL----IYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLT 406

  Fly   951 NRKTVSEGHDNVQAALLDYTLTCYPSVNDKFRGLVNILPEIHAMA 995
            :...:.:.:........|:|...|....::|..|:..||||..:|
Human   407 SASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIA 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftz-f1NP_524143.2 NR_DBD_Lrh-1_like 508..600 CDD:143541 44/91 (48%)
NR_LBD_Ftz-F1_like 794..1024 CDD:132742 54/220 (25%)
NR6A1NP_201591.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 7/22 (32%)
NR_DBD_GCNF_like 52..141 CDD:143543 42/88 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..150 12/63 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..199 11/85 (13%)
Sufficient for interaction with UIMC1. /evidence=ECO:0000250 172..253 21/110 (19%)
NR_LBD_DHR4_like 256..467 CDD:132751 50/200 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278717at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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