DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ftz-f1 and nhr-38

DIOPT Version :9

Sequence 1:	NP_524143.2	Gene:	ftz-f1 / 40045	FlyBaseID:	FBgn0001078	Length:	1027	Species:	Drosophila melanogaster
Sequence 2:	NP_501728.2	Gene:	nhr-38 / 191720	WormBaseID:	WBGene00003629	Length:	355	Species:	Caenorhabditis elegans

Alignment Length:	160	Identity:	52/160 - (32%)
Similarity:	83/160 - (51%)	Gaps:	16/160 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   505 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI--DKTQR-KRCPYCRFQ 566
            |.:|.:|.||..|||:|.::|.:|..||:|:|.::|||:| :.|.|.|  |.|:| ..|.:|||.
Worm    30 EMICSICSDKAEGYHFGAISCAACGAFFRRSVSDQKVYSC-SNRQCSIVHDPTKRGGSCRFCRFL 93

  Fly   567 KCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISPG 631
            ||:..||..:.|:|.|....:.....:|:......:.::.|    :.|.|.|:..:   .||...
Worm    94 KCVSSGMMPQDVKAKRTSSSQQNVTSLYRNMNQSSILLIDQ----IIAFRRSIAAE---RPIFDL 151

  Fly   632 YQQAYPNMNIK----QEIQIPQVSSLTQSP 657
            ..::....|:|    ||.:|.:..| |.||
Worm   152 ISRSTTRTNLKISLHQEYEIMRRIS-TGSP 180

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ftz-f1	NP_524143.2	NR_DBD_Lrh-1_like	508..600	CDD:143541	36/94 (38%)
ftz-f1	NP_524143.2	NR_LBD_Ftz-F1_like	794..1024	CDD:132742
nhr-38	NP_501728.2	ZnF_C4	32..102	CDD:197701	32/70 (46%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24086
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010