DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg3 and ATG3

DIOPT Version :9

Sequence 1:NP_649059.1 Gene:Atg3 / 40044 FlyBaseID:FBgn0036813 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_568934.1 Gene:ATG3 / 836271 AraportID:AT5G61500 Length:313 Species:Arabidopsis thaliana


Alignment Length:345 Identity:157/345 - (45%)
Similarity:199/345 - (57%) Gaps:58/345 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDETKTKPY 66
            |.:....|||    .|.:|.....|.|:|.|||:..|||.|||:||..||||.|.:||.:|.|||
plant     5 QKLHEAFKGT----VERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPY 65

  Fly    67 LPKDKQFLITRNVPCYRR----CKQMEYVGEETLVEEESGDGGWVETH-QLNDDGTTQLEDKICE 126
            ||.||||||||||||.||    .:..|..|.|.||::|..| ||:.|| :..|.|          
plant    66 LPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDND-GWLATHGKPKDKG---------- 119

  Fly   127 LTMEETKEEMHTPDSD----------KSAPGAGGQAEDEDDDEAIDMDDFEESGMLELVDPAVAT 181
                  |||.:.|..|          :|.|...|   .|:||:..||::|:|:..:...|||...
plant   120 ------KEEDNLPSMDALDINEKNTIQSIPTYFG---GEEDDDIPDMEEFDEADNVVENDPATLQ 175

  Fly   182 TTR--KPEPEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTV 244
            :|.  ..||:                .|::|.||||||.|:|||||||||:|:.||||.|..|..
plant   176 STYLVAHEPD----------------DDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQP 224

  Fly   245 EQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQLGVHLYLIIFL 309
            |.:.||||||||:||||:|.||||||.: ||||||||..:|||||..:...|.:..|..||.:||
plant   225 ELVMEDVSQDHARKTVTIEDHPHLPGKH-ASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFL 288

  Fly   310 KFVQTVIPTIEYDFTQNFNM 329
            ||:.:||||||||:|.:|::
plant   289 KFMASVIPTIEYDYTMDFDL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg3NP_649059.1 Autophagy_N 8..135 CDD:281916 60/131 (46%)
Autophagy_act_C 219..280 CDD:281917 42/60 (70%)
Autophagy_C 301..325 CDD:287367 15/23 (65%)
ATG3NP_568934.1 Autophagy_N 7..138 CDD:367757 64/151 (42%)
Autophagy_act_C 37..302 CDD:397886 142/301 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 107 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG2981
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6836
Inparanoid 1 1.050 266 1.000 Inparanoid score I941
OMA 1 1.010 - - QHG53787
OrthoDB 1 1.010 - - D1432328at2759
OrthoFinder 1 1.000 - - FOG0004752
OrthoInspector 1 1.000 - - oto2918
orthoMCL 1 0.900 - - OOG6_102211
Panther 1 1.100 - - LDO PTHR12866
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3344
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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