DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg3 and atg3

DIOPT Version :9

Sequence 1:NP_649059.1 Gene:Atg3 / 40044 FlyBaseID:FBgn0036813 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001011420.1 Gene:atg3 / 496900 XenbaseID:XB-GENE-953266 Length:312 Species:Xenopus tropicalis


Alignment Length:333 Identity:213/333 - (63%)
Similarity:260/333 - (78%) Gaps:25/333 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDETKTKP 65
            ||||:|||||.||.||||||||||||||:||||:|||||:|||||||||||||||:||:|:|.||
 Frog     1 MQSVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKP 65

  Fly    66 YLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVET--HQLNDDGTTQLEDKICEL 127
            |||.|||||:|:|||||:|||||||..| |.::||:.||||||:|  |.|     |.:.:.:.|:
 Frog    66 YLPNDKQFLMTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHHSL-----TGVTEAVKEI 125

  Fly   128 TMEETKEEMHTPDSDKSAPGAGGQAEDEDDD-EAIDMDDFEESGMLELVDPAVATTTRKPEPEAK 191
            |:|       |.|..|:........:|:||: ||.||:|:||||:|:..|..|.|:..|   || 
 Frog   126 TLE-------TQDCGKTTSNIAVDDDDDDDEGEAADMEDYEESGLLDNDDATVDTSKIK---EA- 179

  Fly   192 ASPVAAASGDAEASGDSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTVEQMYEDVSQDHA 256
            ..|.|...|:     |::|.||||||:|:|||||||||||:.||||||:|||||.||||:||||.
 Frog   180 CKPKADLGGE-----DAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHV 239

  Fly   257 KKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQLGVHLYLIIFLKFVQTVIPTIEY 321
            |||||:|:|||||.|.|.||||||||::|||||:||.||||:||||:||:|||||||.|||||||
 Frog   240 KKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEY 304

  Fly   322 DFTQNFNM 329
            |:|::|.|
 Frog   305 DYTRHFTM 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg3NP_649059.1 Autophagy_N 8..135 CDD:281916 87/129 (67%)
Autophagy_act_C 219..280 CDD:281917 48/60 (80%)
Autophagy_C 301..325 CDD:287367 19/23 (83%)
atg3NP_001011420.1 Autophagy_N 8..131 CDD:367757 88/134 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..156 6/19 (32%)
Autophagy_act_C 202..263 CDD:367758 48/60 (80%)
Autophagy_C 284..308 CDD:371018 19/23 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3266
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6836
Inparanoid 1 1.050 430 1.000 Inparanoid score I1695
OMA 1 1.010 - - QHG53787
OrthoDB 1 1.010 - - D1432328at2759
OrthoFinder 1 1.000 - - FOG0004752
OrthoInspector 1 1.000 - - oto103261
Panther 1 1.100 - - LDO PTHR12866
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R108
SonicParanoid 1 1.000 - - X3344
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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