DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12477 and Mkrn1

DIOPT Version :10

Sequence 1:NP_649055.1 Gene:CG12477 / 40040 FlyBaseID:FBgn0036809 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_061280.2 Gene:Mkrn1 / 54484 MGIID:1859353 Length:481 Species:Mus musculus


Alignment Length:209 Identity:76/209 - (36%)
Similarity:110/209 - (52%) Gaps:17/209 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VPSTNSPSSQIEQKGNEAIVPNYKAATAGEQGEAQAGATCTTV-----------AVRPSGVATSA 71
            ||...|.:.:..:|....:....:.......||.:.|..|..:           .:.|...|..:
Mouse   189 VPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPVDAAQRS 253

  Fly    72 DIVKGSSSVSSHVQPSWRSSFA--RSQDKKCGICFETIMEKEG-GDKRFGILPSCNHVFCFQCIC 133
            ..:|  |.:.:| :.....|||  ||:|..||||.|.:.||.. .::|||||.:|||.:|.:||.
Mouse   254 QHIK--SCIEAH-EKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIR 315

  Fly   134 TWRHATQYAYQVTRACPECRVWSNFVCPSAFWVEEKVAKDQLINDHLAAMRARDCKYFKQGQGVC 198
            .||.|.|:..::.::|||||:.||||.||..|||||..|.:||..:..||..:.|:||.:|:|.|
Mouse   316 KWRSAKQFESKIIKSCPECRITSNFVIPSENWVEEKEEKQKLIQKYKEAMSNKACRYFDEGRGSC 380

  Fly   199 LFGNKCFYKHSIPN 212
            .||..|||||:.|:
Mouse   381 PFGGNCFYKHAYPD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12477NP_649055.1 RING_Ubox 97..156 CDD:473075 28/59 (47%)
Mkrn1NP_061280.2 zf-CCCH_4 59..80 CDD:465626
ZnF_C3H1 88..110 CDD:214632
PHA03096 <221..370 CDD:222981 57/151 (38%)
Makorin-type Cys-His 236..263 4/28 (14%)
RING-HC_MKRN1_3 278..338 CDD:319644 28/59 (47%)
MKRN1_C 392..481 CDD:464890 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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