DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12477 and mkrn2

DIOPT Version :9

Sequence 1:NP_649055.1 Gene:CG12477 / 40040 FlyBaseID:FBgn0036809 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001005447.1 Gene:mkrn2 / 448038 XenbaseID:XB-GENE-5879487 Length:418 Species:Xenopus tropicalis


Alignment Length:245 Identity:78/245 - (31%)
Similarity:115/245 - (46%) Gaps:28/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HVDTGVLPVPSTNSPSSQIEQKGN---EAI--------VPN-YKAATA-----GEQGEAQAGATC 57
            |.|..:.|..:.:.|.|::|.|.:   |||        :|: |..|..     .:.|....|.:|
 Frog   120 HPDPALRPGCAADPPVSELEAKPHSYLEAICTGLDETPIPSAYPDAPQQLCPFAQAGGCHYGESC 184

  Fly    58 TTVAVRPSGVATSADIVKGSSSVSSHVQPSWRSSFAR----------SQDKKCGICFETIMEKEG 112
            ..:......:.....:.........|.:....::|.|          |:.|.|.||.|.:.:|:.
 Frog   185 PYIHGNVCEICGLQVLHPYDQEQRGHHEKLCMANFERDMERAFAFQASEGKVCSICMERVYDKQS 249

  Fly   113 -GDKRFGILPSCNHVFCFQCICTWRHATQYAYQVTRACPECRVWSNFVCPSAFWVEEKVAKDQLI 176
             .::|||||.:|:|.:|..||..||.|.|:...|.::||||||.|.||.|||:|||::..|.:||
 Frog   250 PSERRFGILSNCHHTYCLACIRQWRCARQFENPVIKSCPECRVISEFVIPSAYWVEDQSKKFELI 314

  Fly   177 NDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPNADYVDVGLPTHALG 226
            ......|..:.||||.||:|.|.||.||.|.|:.|:....:...|...||
 Frog   315 EAFKQGMGKKACKYFDQGRGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLG 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12477NP_649055.1 RING 99..153 CDD:238093 23/54 (43%)
mkrn2NP_001005447.1 YTH1 <5..>80 CDD:227416
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..100
PHA03096 <178..310 CDD:222981 42/131 (32%)
Makorin-type Cys-His. /evidence=ECO:0000255 192..221 2/28 (7%)
RING-HC_MKRN2 234..291 CDD:319645 24/56 (43%)
RING-HC finger (C3HC4-type) 237..290 CDD:319645 22/52 (42%)
MKRN1_C 360..>412 CDD:374139 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7557
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000752
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11224
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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