DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12477 and Tmc6

DIOPT Version :9

Sequence 1:NP_649055.1 Gene:CG12477 / 40040 FlyBaseID:FBgn0036809 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_663414.3 Gene:Tmc6 / 217353 MGIID:1098686 Length:810 Species:Mus musculus


Alignment Length:152 Identity:35/152 - (23%)
Similarity:50/152 - (32%) Gaps:35/152 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CGICFETIMEKEGGDKRFGILPSCNHVFCFQCICTWRHATQYAYQVT--RACPECRVWSNFVCPS 162
            |.|...::....|...|.|   |...:......|:|      .|:||  ||   .||..:.:|..
Mouse   354 CIILVYSMSHSFGESYRVG---STKGIHALTVFCSW------DYKVTQKRA---SRVQQDSICTQ 406

  Fly   163 AFWVEEKVAKDQLINDHLAAMRARDCKYFKQ----GQG--VCLFGNKCFYKHSIPNADYVDVGLP 221
                    .|:.|...||.......|...:|    |.|  :|| |:......::.....|.:..|
Mouse   407 --------LKELLAEWHLRKRPRSVCGQLRQVVVLGLGWLLCL-GSTMGCTVAVLTFSEVMIQRP 462

  Fly   222 ------THALGLPIPSDFSGLG 237
                  ..||.||:......||
Mouse   463 ASGGQGVEALALPLVVSVLNLG 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12477NP_649055.1 RING 99..153 CDD:238093 13/54 (24%)
Tmc6NP_663414.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
TMC 539..645 CDD:369533
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 775..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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