DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12477 and lep-2

DIOPT Version :10

Sequence 1:NP_649055.1 Gene:CG12477 / 40040 FlyBaseID:FBgn0036809 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001023510.1 Gene:lep-2 / 176918 WormBaseID:WBGene00002278 Length:413 Species:Caenorhabditis elegans


Alignment Length:347 Identity:99/347 - (28%)
Similarity:129/347 - (37%) Gaps:124/347 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTVASNDQHVDTGVLP---VPSTNSPSSQIEQKGNEA----------------IVPNYKAATAG 46
            :.|...||:      ||   .|.|:.....::..|...                .||.:|....|
 Worm    53 LHTRPRNDE------LPSCSTPQTSQNQQNLQNSGQRVRPKQLPELKFNAQAAEFVPRWKMPQRG 111

  Fly    47 EQGEAQAGATCTTVAVRPSGVATSADIVKGSSSV-SSHVQ------PSWRSS-----------FA 93
                     ..|:.|    |.|.|||..:.|||. |||.|      |..:.|           ||
 Worm   112 ---------PVTSYA----GAAASADHGESSSSFQSSHEQAQLMMCPYHQKSGDCNRQDMDCPFA 163

  Fly    94 -------------------------------------------RSQDKKCGICFETIMEKEGGDK 115
                                                       :::.|.||||.|.|.||   :.
 Worm   164 HGNYCDMCQQWSLHPYNAELRKKHENECVANHTTEMERAFLLQKTEQKTCGICMENIFEK---NL 225

  Fly   116 RFGILPSCNHVFCFQCICTWRHATQ----YAYQVTRACPECRVWSNFVCPSAFWVEEKVAKDQLI 176
            |||||..|.|.||..||..||...|    .|.:..|:|||||..|::|.||.||||....||.||
 Worm   226 RFGILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCPECRQHSDYVIPSLFWVESGQEKDLLI 290

  Fly   177 NDHLAAMRARDCKYF--KQGQGVCLFGNKCFYKHSIPNADYVDVGLPTHALGLPIPSDFSGLGNC 239
            ..:....:.:.|||:  ::.:|.|.|||||||||.:|:.. :|.|....:...|...||      
 Worm   291 EMYKENTKRKICKYYSNERSRGACPFGNKCFYKHQLPDGS-IDPGEAPSSRRRPRLVDF------ 348

  Fly   240 LILVPFPNMFFDDFSNSDDYDF 261
                     .|||.|:||:..|
 Worm   349 ---------LFDDNSDSDEETF 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12477NP_649055.1 RING_Ubox 97..156 CDD:473075 30/62 (48%)
lep-2NP_001023510.1 zf-CCCH_3 1..>56 CDD:464787 0/2 (0%)
PHA03096 <157..302 CDD:222981 44/147 (30%)
RING-HC_MKRN 211..267 CDD:438184 28/58 (48%)
COG5252 <275..>331 CDD:227577 25/56 (45%)

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