Sequence 1: | NP_649055.1 | Gene: | CG12477 / 40040 | FlyBaseID: | FBgn0036809 | Length: | 265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001135584.1 | Gene: | mkrn3 / 100216134 | XenbaseID: | XB-GENE-5958700 | Length: | 370 | Species: | Xenopus tropicalis |
Alignment Length: | 306 | Identity: | 77/306 - (25%) |
---|---|---|---|
Similarity: | 126/306 - (41%) | Gaps: | 93/306 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 HVDTG-------VLP-VPSTNSPSSQIEQKGNEAIVPNYKAAT--------AGEQGEAQAG---- 54
Fly 55 -----------------ATCTTVAVRPSGVATSADIVK-GSSSVSSHVQPSWRSSFARSQDKKCG 101
Fly 102 ICFETIMEKEGGDKRFGILPSCNHVFCFQCICTWRHATQYAYQVTRACPECRVWSNFVCPSAFWV 166
Fly 167 EEKVAKDQLINDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPN-----------------AD 214
Fly 215 YVDVGLPTHALGLPIPSDFSGLGNCLILVPFPNMFFDDFSNSDDYD 260 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12477 | NP_649055.1 | RING | 99..153 | CDD:238093 | 21/53 (40%) |
mkrn3 | NP_001135584.1 | YTH1 | <9..>60 | CDD:227416 | |
zf-CCCH_4 | 14..33 | CDD:375512 | |||
RING-HC_MKRN4 | 181..240 | CDD:319646 | 24/58 (41%) | ||
RING-HC finger (C3HC4-type) | 184..236 | CDD:319646 | 21/51 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1388677at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000752 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11224 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |