DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic4 and rangrf

DIOPT Version :9

Sequence 1:NP_001262021.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_002941865.3 Gene:rangrf / 496602 XenbaseID:XB-GENE-5760490 Length:238 Species:Xenopus tropicalis


Alignment Length:16 Identity:5/16 - (31%)
Similarity:9/16 - (56%) Gaps:0/16 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 EVRKNISVNDGLPLHF 212
            |.::.:|.:|....||
 Frog   103 EYQEGVSDSDAARYHF 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic4NP_001262021.1 PTZ00169 26..288 CDD:240302 5/16 (31%)
Mito_carr 26..100 CDD:278578
Mito_carr 104..201 CDD:278578 1/3 (33%)
Mito_carr 211..292 CDD:278578 2/2 (100%)
rangrfXP_002941865.3 Mog1 58..238 CDD:238137 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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