DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic4 and Tpc2

DIOPT Version :9

Sequence 1:NP_001262021.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster


Alignment Length:305 Identity:61/305 - (20%)
Similarity:122/305 - (40%) Gaps:53/305 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGFASMCVAFAVAPIDIVKTHMQIQ---------RQKRSILGTVKRIHSLKGYLGFYDGFSAAIL 81
            ||.|.........|:|::|...|:|         .:.|.::...|.:::.:|..|.:.|.::..:
  Fly    16 GGIAGAATRTITQPLDVLKIRFQMQVEPVTNHKGSKYRGVIHAFKSVYAEEGMRGMFRGHNSGQV 80

  Fly    82 RQMTSTNIHFIVYDTGKKM----EYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKE 142
            ..::...:.|..|:..:.|    :|.....:|...|.|.:||..|:....|.|::..:|   :..
  Fly    81 LSISYALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGIAGCLGAVAAQPFDVVRTQM---VAA 142

  Fly   143 PPYKRRNYKHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRKNISVNDG 207
            .|..||:..:.|.||.::.|.|||..|.:|....:.:......:...||..:...|......:..
  Fly   143 DPSSRRSQMNTFTGLRKVYKMEGWMGLSRGLPFTLVQVFPLVGANFLFYKYLNAAVLMAKPPDQR 207

  Fly   208 LPLH----FLTSLGTSIISSAITHPLDVVR----------------------TIMMNSRPGEFRT 246
            ..:|    ||....:.:::..|.:|.|:::                      ||:     |...|
  Fly   208 QEIHGAFLFLNGALSGVLAKMIVYPADLLKKRIQLMAFKQERKTFGRNPECPTIL-----GCITT 267

  Fly   247 VFQASVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHF 291
            .|:..      |:.|.|:|.:||:::....:.:.|.:|:..:.|:
  Fly   268 TFREE------GIGGFYKGMLPTLLKAGLMSAVYFSIYDMFKRHY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic4NP_001262021.1 PTZ00169 26..288 CDD:240302 60/300 (20%)
Mito_carr 26..100 CDD:278578 15/82 (18%)
Mito_carr 104..201 CDD:278578 24/96 (25%)
Mito_carr 211..292 CDD:278578 20/107 (19%)
Tpc2NP_001246511.1 PTZ00169 23..304 CDD:240302 57/294 (19%)
Mito_carr 23..99 CDD:278578 12/75 (16%)
Mito_carr 108..194 CDD:278578 23/88 (26%)
Mito_carr 216..307 CDD:278578 19/102 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441582
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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