DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic4 and Rim2

DIOPT Version :10

Sequence 1:NP_649054.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster


Alignment Length:339 Identity:77/339 - (22%)
Similarity:123/339 - (36%) Gaps:87/339 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGFASMCVAFAVAPIDIVKTHMQI------------------------------QRQKRS----- 55
            ||.|....|....|:::|||.:|.                              ||:|.|     
  Fly    15 GGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTTILR 79

  Fly    56 ------ILGTVKRIHSL-------------------------KGYLGFYDGFSAAILRQMTSTNI 89
                  ::|.|:||.::                         :|....:.|....::....|..|
  Fly    80 NRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAI 144

  Fly    90 HFIVY----DTGKKMEYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPPYKRRNY 150
            :|..|    :|...:.:|:|||.|..|:....||...|....|...:..|||.|     |..:..
  Fly   145 YFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLD-----YNSKVQ 204

  Fly   151 KHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEV--RKNISVNDGLP---- 209
            ..|...:.|:..:.|..|.|||.:.:.| ....|......|:.||:::  ::|....|...    
  Fly   205 MTVRQCIERVYAQGGVAAFYKGITASYF-GICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDF 268

  Fly   210 LHFLTSLGTS-IISSAITHPLDVVRTIMMNSRPGEFRTVFQASVHMM--RFGVMGPYRGFVPTIV 271
            |.|:.:...| .|:|.|.:|.:|.||.:...  |.....|..::|.:  ..|..|.|||....:|
  Fly   269 LEFMMAGAVSKTIASCIAYPHEVARTRLREE--GNKYNSFWQTLHTVWKEEGRAGLYRGLATQLV 331

  Fly   272 RKAPATTLLFVLYE 285
            |:.|.|.::...||
  Fly   332 RQIPNTAIMMATYE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic4NP_649054.1 Mito_carr 26..100 CDD:395101 24/143 (17%)
Mito_carr 104..201 CDD:395101 26/98 (27%)
Mito_carr 211..292 CDD:395101 23/78 (29%)
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 23/140 (16%)
Mito_carr 163..253 CDD:395101 26/95 (27%)
Mito_carr 268..355 CDD:395101 24/80 (30%)

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