DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic4 and slc25a10a

DIOPT Version :9

Sequence 1:NP_001262021.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_002661286.1 Gene:slc25a10a / 100332610 ZFINID:ZDB-GENE-131127-11 Length:288 Species:Danio rerio


Alignment Length:292 Identity:108/292 - (36%)
Similarity:158/292 - (54%) Gaps:27/292 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQRQ-KRSILGTVKRIHSLKGYLGFYDGFSAAI 80
            |..:.||:|||.||...|....|:|::|.|:|.|:: |..:.|...::....|....|:|.||::
Zfish     3 ETRVSRWYFGGIASCAAACCTHPLDLIKVHLQTQQEVKMRMTGMAVQVVRSDGVFALYNGLSASL 67

  Fly    81 LRQMTSTNIHFIVYDTGKKMEYVDRDS----------YLGKIILGCVAGACGSAFGIPTDLINVR 135
            .|||:.:...|.:|:|       .||.          :..||:|....|..|...|.|.|::|||
Zfish    68 CRQMSYSMTRFAIYET-------VRDQIASQNQGPMPFYQKILLAAFGGFTGGFIGTPADMVNVR 125

  Fly   136 MQTDMKEPPYKRRNYKHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRK 200
            ||.|||.||..||||.|..|||:|:.||||.:.|:.|.|:|..:.:|.|..|::.||..|..|..
Zfish   126 MQNDMKLPPVLRRNYAHALDGLLRVLKEEGIRKLFSGASMAASRGALVTVGQLSCYDQAKQLVLG 190

  Fly   201 NISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSRPGEFRTVFQASVHMMR-FGVMGP-- 262
            ...:.|.:..||:.|......::.:..|:|||:|.:|||: ||:|.:    :|.:. .|.:||  
Zfish   191 TGLMTDNIFTHFVASFIAGGCATVLCQPMDVVKTRLMNSK-GEYRGL----IHCLSDTGKLGPKA 250

  Fly   263 -YRGFVPTIVRKAPATTLLFVLYEQLRLHFGI 293
             |:|.||..:|..|.|.|.|:..|||||:|||
Zfish   251 FYKGLVPAGIRLIPHTVLTFIFLEQLRLYFGI 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic4NP_001262021.1 PTZ00169 26..288 CDD:240302 98/276 (36%)
Mito_carr 26..100 CDD:278578 24/74 (32%)
Mito_carr 104..201 CDD:278578 44/106 (42%)
Mito_carr 211..292 CDD:278578 32/84 (38%)
slc25a10aXP_002661286.1 Mito_carr 12..86 CDD:278578 24/80 (30%)
Mito_carr 94..190 CDD:278578 42/95 (44%)
Mito_carr 195..281 CDD:278578 33/90 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594908
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D404074at33208
OrthoFinder 1 1.000 - - FOG0002037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45618
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.810

Return to query results.
Submit another query.