DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6893 and DIC2

DIOPT Version :10

Sequence 1:NP_001369058.1 Gene:CG6893 / 40038 FlyBaseID:FBgn0036807 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_194188.1 Gene:DIC2 / 828559 AraportID:AT4G24570 Length:313 Species:Arabidopsis thaliana


Alignment Length:307 Identity:89/307 - (28%)
Similarity:140/307 - (45%) Gaps:56/307 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GGVAGAIAQCFTAPFDLIEARM-----------VVIKKDRGMASNLQQA---------------- 58
            ||:|..||.|.|.|.|||:.|:           |.:.:......|...|                
plant     9 GGIASVIAGCSTHPLDLIKVRLQLHGEAPSTTTVTLLRPALAFPNSSPAAFLETTSSVPKVGPIS 73

  Fly    59 -----IRTHGFISLYDGLSAQLLRQLTYTSMRFHLYEMGKEHLDDP-AGLLD---KVLVAALAGC 114
                 :::.|..:|:.|:||.||||..|::.|..|||:.|....|| :|.|:   |:....:||.
plant    74 LGINIVKSEGAAALFSGVSATLLRQTLYSTTRMGLYEVLKNKWTD
PESGKLNLSRKIGAGLVAGG 138

  Fly   115 VAGVVGTPMELINTRMQVNRALPKETRWNYRNVFDGLYRVTREEGFTKLYSGCFLSFMRSSLITI 179
            :...||.|.::...|||.:..||...|.||..|.|.:..:.:.||.|.|:.|..|:..|:.::|.
plant   139 IGAAVGNPADVAMVRMQADGRLPLAQRRNYAGVGDAIRSMVKGEGVTSLWRGSALTINRAMIVTA 203

  Fly   180 SQNAAYDQAKQIYAEFFHMKHDNTLLHLISSVTAAFVCGPIIKPIENLRYLRMVDSRRLIN---- 240
            :|.|:|||.|:...|...| :|....|:::|..|.||......|::       |...|::|    
plant   204 AQLASYDQFKEGILENGVM-NDGLGTHVVASFAAGFVASVASNPVD-------VIKTRVMNMKVG 260

  Fly   241 --------SISYMMRFGSRGPFRGMVPYVLRMVPNTVITFLSFEQLR 279
                    ::..:...|:...::|.||.|.|..|.||:.|::.||:|
plant   261 AYDGAWDCAVKTVKAEGAMALYKGFVPTVCRQGPFTVVLFVTLEQVR 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6893NP_001369058.1 Mito_carr 20..96 CDD:395101 30/106 (28%)
Mito_carr 98..192 CDD:395101 34/97 (35%)
DIC2NP_194188.1 Mito_carr 3..118 CDD:395101 30/108 (28%)
Mito_carr 122..220 CDD:395101 33/97 (34%)
Mito_carr 225..312 CDD:395101 22/90 (24%)

Return to query results.
Submit another query.