DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12c1 and cyp27a1.2

DIOPT Version :10

Sequence 1:NP_649052.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_073769098.1 Gene:cyp27a1.2 / 795106 ZFINID:ZDB-GENE-081104-511 Length:580 Species:Danio rerio


Alignment Length:526 Identity:151/526 - (28%)
Similarity:257/526 - (48%) Gaps:56/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLRANSQLAATRNPDASSYVQ------QLESEWEGAKPFTELPGPTRWQ-LFRGFQKGGEYHQLG 66
            |.|:.:..||.    ||..||      :.|::....|.||.|     :| ||:|:.  ...|:| 
Zfish    93 GFRSAAGNAAA----ASVSVQDGHRKLKTEADLPEIKIFTML-----YQMLFKGYL--NSVHEL- 145

  Fly    67 MDDVMRLYKKQ-FGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKD 130
                 :||:|| :|.:..|..  |....:...:||..|::.|.:.::|.||.......:|:.|..
Zfish   146 -----QLYQKQVYGPLWKINA--GNLQGISISSVELLEELLRKDEKYPCRGYMTLWTEHRDLRGI 203

  Fly   131 EFFKNCMGLF-GNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIRD-KESQEVP 193
            .:     |.| ..|.:|.|.|:.:|..::..::...|...:..|...|:.||..:|: ..:.::.
Zfish   204 SY-----GPFTEEGEKWYKLRAVLNKRMLHPKDSVQYGDVVNAVITDFIKRIYYLREMSPTGDLV 263

  Fly   194 GDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGVRPSLYR-YIP 257
            .:..|.:...:.|.:|::..:..:|.| |...|.|..|....|..:......:.:.|:..| |. 
Zfish   264 SNLTNELYRFSLEGIASILFETRIGCL-EKEIPAETQKFINFIAQMFTYSMHVALLPNWTRKYF- 326

  Fly   258 TPTYKKFSRAMDEIFDTCSMYVNQAIERIDRK--SSQGDSNDHKSVLEQLLQIDRKLAVVMAMDM 320
             |.::|:....|.||...:..::..:|.|.::  ::|..:.::.:.|....:|.||.......::
Zfish   327 -PFWQKYIDGWDGIFKFGTKMIDMKMEAIQKRVDTNQDVAGEYLTYLLSNGKISRKDVYGSVSEL 390

  Fly   321 LMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRL 385
            |:.|||:||..:...|..|:|:||.|:.|.:|| :|:.......|.|::.|:|:|:|||||:|||
Zfish   391 LLAGVDSTSNTMLWALYLLSKDPEAQETLYQEV-TKVLKDDRIPTAEEVNSMPFLKAVIKETLRL 454

  Fly   386 YPVTFGNAR-SAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDV 449
            |||...|:| .|..:||:..|..||.|...:.:..:.:|::::|..::|.||||||   |.::..
Zfish   455 YPVVPVNSRLIAETEVVIGEYFFPKKTTFTLCHYVISRDEKVFPEPQKFKPERWLR---DGRTRP 516

  Fly   450 LMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTEKPYKCRF----LYK 510
                  |.|..:|||||.|.|||:||.:|||.|.:|.|::.|.:..: .|....|..|    :|.
Zfish   517 ------NPFGSIPFGFGVRACVGRRIAELEMHLALARLIKLFEMRPD-PTVGEVKANFRSLHMYI 574

  Fly   511 PNIPLK 516
            .|..||
Zfish   575 RNYQLK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_649052.1 CYP24A1-like 76..516 CDD:410677 128/450 (28%)
cyp27a1.2XP_073769098.1 None

Return to query results.
Submit another query.