DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp27b1

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001298720.1 Gene:cyp27b1 / 793309 ZFINID:ZDB-GENE-111005-2 Length:505 Species:Danio rerio


Alignment Length:495 Identity:134/495 - (27%)
Similarity:232/495 - (46%) Gaps:41/495 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KPFTELPGPTRWQLFRG-FQKGG--EYHQLGMDDVMR---LYKKQFGDICLIPGLFGMPSTVFTF 97
            |...::|||:..:..|. |.|.|  ..|||.::...:   ::|..||.|.          ||...
Zfish    39 KTLEQMPGPSPARFIRDLFMKRGFSRLHQLQLEGRQKYGPMWKASFGPIL----------TVHVA 93

  Fly    98 NVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMGLF-GNGAEWGKNRSAVNPVLMQHR 161
            ..|..::|.|.|||.|||........||..|.:.:     ||. ..|.||...||.::..:::.:
Zfish    94 EPELIQQVLRQEGQHPVRSELSSWKDYRALRGEGY-----GLLTAEGEEWQCVRSLLSKHMLRPQ 153

  Fly   162 NVAIYLKPMQRVNRQFVNRIREIRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPP 226
            .|..|...:..|....:.:::....:.|..:..|..........|.:::|..:..:|.| :|..|
Zfish   154 AVEAYDGALNAVVSDLLQKLKLRSQESSSRIVSDISAEFYRFGLEGISSVLFESRIGCL-DAVVP 217

  Fly   227 PEASKLFKNIEVL-MDSFFDLGVRPSLYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKS 290
            .|..:..::|..: :.:...:.:...|:|.:|.| :..|.|..|.:|:....:::|.::...:|.
Zfish   218 VETERFIQSINTMFVMTLLTMAMPQWLHRLLPKP-WDTFCRCWDVMFEFAKGHIDQRLQEEKQKL 281

  Fly   291 SQGDSNDHKSVLEQLLQIDRKLAVVMA--MDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEV 353
            ..|:..:.:.:...|.|....|..|.:  .::|:.||||.|:.:|..|..|:::|:.|..||:||
Zfish   282 ECGEQLEGRYLTYFLSQAGLPLTSVYSNVTELLLAGVDTISSTLSWSLYELSRHPDVQTALRDEV 346

  Fly   354 LSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNS 418
            ||.:.. .|.....|:.::|.|:||:||.||||||...|||....|:.:.||.|||.|.:.:.:.
Zfish   347 LSVMKD-RSVPQASDVAAMPLLKAVVKEILRLYPVIPANARVINKDIEVGGYVIPKNTLITLCHY 410

  Fly   419 FLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELT 483
            ...:|.:.:.....|.|:||     .|:||     ..:.:..:|||.|.|.|:|:||.:||:.|.
Zfish   411 ATSRDPQQFRDPDSFRPQRW-----GDRSD-----RSHPYATVPFGVGKRSCIGRRIAELEVYLA 465

  Fly   484 VANLVRNFHIE--YNYSTEKPYKCRFLYKPNIPLKFKFTD 521
            ::.::.:|.:|  ....|..| ..|.|..|...:..:||:
Zfish   466 LSRILMHFTMEPVRENDTVHP-MTRTLLVPERQIDLRFTE 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 127/468 (27%)
cyp27b1NP_001298720.1 p450 45..493 CDD:278495 130/476 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.980

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