DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp27a1.3

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_002934001.3 Gene:cyp27a1.3 / 594905 XenbaseID:XB-GENE-18386061 Length:518 Species:Xenopus tropicalis


Alignment Length:535 Identity:140/535 - (26%)
Similarity:251/535 - (46%) Gaps:55/535 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VKHGLRANSQLA---ATRNPDASSYVQQLESEWEGAKPFTELPGPT-----RWQLFRGFQKGGEY 62
            ::...|||.|..   ||.....::.|     |.:..|...:||||:     .|...||:.  ...
 Frog    14 LQQSCRANVQTVRKKATLGVSGATVV-----EGKTLKTLDDLPGPSPLKLLYWIFLRGYL--FRT 71

  Fly    63 HQLGMDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNK 127
            |:|.:     ::||.:|.:..:..  ...:.|...:.:..|.:.|.||::|.|.....:..:|:.
 Frog    72 HELQV-----IFKKTYGPMWKMSD--RQHAMVTVASPDLLESLLRKEGKYPTRADMFIMREHRDL 129

  Fly   128 RKDEFFKNCMGLFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIRDKESQEV 192
            |...:..    :...|.:|.:.|:.:|..:::.|...:|...|..|....:.:|:|:   .:|..
 Frog   130 RGHSYGP----VTEEGHQWHRIRTILNQRMLKPRETVVYAGSMNEVVSDLLLKIKEL---TAQSS 187

  Fly   193 PGDFMNTINHL----TFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGVRPSLY 253
            .|..:|.:..|    .|||:.||..:..||.|.: ...||..|...:|.::::....|...|...
 Frog   188 SGTQVNGVAELMYKFAFESICTVLFETRLGCLNK-EILPETQKFIDSIGIMLEHLTMLTRLPQWT 251

  Fly   254 RYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGD--SNDHKSVLEQLLQIDRKLAVVM 316
            :.| .|.:.::..|.|.|||.....:::.:|.|:.:..:|:  ..::.:.|....::..:.....
 Frog   252 KGI-LPYWGRYIEAWDTIFDFGKKLIDKKMEDIEGRLKRGEEVEGEYLTYLLSSGKLSMEEVYGS 315

  Fly   317 AMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKS---LPYLRAV 378
            .:::|..||||||..::..|..|::|||.|..|.:||:..:..    .|:.|.::   :|.|:||
 Frog   316 VVELLQAGVDTTSNTLTWALYQLSRNPEIQNNLYQEVIRVIPG----ETIPDSEAIARMPLLKAV 376

  Fly   379 IKESLRLYPVTFGNARSAG-ADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRK 442
            |||:|||:||...|||... .:|.:..|..|..|:.::.:..:.:|:..:|.|..|:||||||  
 Frog   377 IKETLRLFPVVPENARMINEKEVTIKDYVFPVKTQFILGHYAISRDETTFPEADRFLPERWLR-- 439

  Fly   443 DDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYST-EKPYKCR 506
                 |..|..  :.|..:|||:|.|.|||:||.:|||.|.::.:::.|.:..:... |...|.|
 Frog   440 -----DSGMKH--HPFGSIPFGYGVRACVGRRIAELEMHLALSRIIKMFQVIPDPDLGEVGAKNR 497

  Fly   507 FLYKPNIPLKFKFTD 521
            .:...|.|:..:|.:
 Frog   498 AVLVANRPVNLRFIE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 125/472 (26%)
cyp27a1.3XP_002934001.3 cytochrome_P450 79..508 CDD:425388 121/452 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

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