DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and si:dkey-91i10.3

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001116749.1 Gene:si:dkey-91i10.3 / 565876 ZFINID:ZDB-GENE-081105-124 Length:513 Species:Danio rerio


Alignment Length:516 Identity:139/516 - (26%)
Similarity:240/516 - (46%) Gaps:80/516 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KPFTELPGPT-----RWQLFRGFQKGGEYHQLGMDDVM---RLYKKQFGDICLIPGLFGMPSTVF 95
            |...:|.||:     .|...:|:.:  ..||:.::...   .|:|.::|.:.::           
Zfish    44 KTMDDLDGPSFLTSLYWLFGKGYFQ--TTHQMQIEHSKIYGPLWKSKYGPLVIV----------- 95

  Fly    96 TFNV---ETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMG-LFGNGAEWGKNRSAVNPV 156
              ||   :..|:|.|.||:.|:|   ..:.|:|..||  ...:..| |...|.||.:.||.:||.
Zfish    96 --NVASADLIEQVLRQEGRHPIR---TDMPHWRGYRK--LRNHAYGPLTEMGPEWQRIRSILNPR 153

  Fly   157 LMQHRNVAIYLKPMQRVNRQFVNRIREIRDKESQEV-PGDFMNTINHLTFESVATVALDRELGLL 220
            :::.::|:.|...:..|...|:.::.:::..:..:| ..|....:....||.:::|..:..:|.|
Zfish   154 MLKPKHVSNYTNAINGVVSDFIEKMAKLKTTKGNDVMVYDVAGELYKFAFEGISSVLFETRMGCL 218

  Fly   221 REANPPPEASKLF--------KNIEVLMDSFFDLGVRPSLYRYIPTPTYKKFSRAMDEIFDTCSM 277
            .:..|......:|        ..|.:|...|        |:.|:  |.:|.|....|.:|.....
Zfish   219 NDEIPEETQKFIFSVGEMFRLSPIVILFPKF--------LWPYM--PFWKHFVAVWDHLFKVADE 273

  Fly   278 YVNQAIERIDRKSSQGDSNDHKSVLEQLLQIDRKLAVVMA--MDMLMGGVDTTSTAISGILLNLA 340
            .|.|.:..|..|...|...:.:.:...|:........|:.  .::|:.||||||..||..|.:||
Zfish   274 LVQQKMTEIQEKVKTGSPVEGEYLTHLLISEQMSFTEVLGSITELLLAGVDTTSNTISWALYHLA 338

  Fly   341 KNPEKQQRLREEVLS-----KLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNAR-SAGAD 399
            :.||.||:|.|||:|     |..|      .:|:..:|.|:|:::|:||||||..|||| .|..:
Zfish   339 REPEIQQKLHEEVVSVCPGDKTPS------SDDITRMPLLKAIVRETLRLYPVVPGNARVVAENE 397

  Fly   400 VVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDL--NAFIYLP 462
            :|:..:..||.|...:.:..:..|:.::|....|:|:||:|.:          |.|  :.|..:|
Zfish   398 IVVGDHLFPKNTLFHLCHFAVSYDETVFPDPFAFLPQRWIREQ----------KQLSQHPFGSVP 452

  Fly   463 FGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYS--TEKPYKCRFLYKPNIPLKFKFTD 521
            ||||.|.|:|:|:.:|||.|.::.|::.:.:..:.|  |.||. .|.|..|...:..:|.|
Zfish   453 FGFGIRACLGRRVAELEMYLLLSRLIKRYEVRPDPSGKTVKPI-TRTLLVPATSIDLQFID 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 130/489 (27%)
si:dkey-91i10.3NP_001116749.1 p450 52..510 CDD:278495 134/504 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

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