DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp27c1

DIOPT Version :10

Sequence 1:NP_649052.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001011341.1 Gene:cyp27c1 / 496805 XenbaseID:XB-GENE-6257635 Length:469 Species:Xenopus tropicalis


Alignment Length:498 Identity:149/498 - (29%)
Similarity:240/498 - (48%) Gaps:51/498 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LPGP-TRWQLFRGFQKGGEYHQLG-MDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVY 106
            :||| |...|...|.:.|    .| :.::.:.:.:|:|.|  ....||....|...:.:...:|.
 Frog     1 MPGPSTMANLVEFFWRDG----FGRIQEIQQKHARQYGRI--FKSHFGPQFVVSIADKDMVAQVL 59

  Fly   107 RTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMGLF-GNGAEWGKNRSAVNPVLMQHRNVAIYLKPM 170
            |.|...|.|...|....||..|     ....||. ..|.:|...||.:...:::.|:||:|...:
 Frog    60 RAERDAPQRANMESWHEYRELR-----GRSTGLISAEGEKWLNMRSVLRQKILRPRDVAMYSGGV 119

  Fly   171 QRVNRQFVNRIREIRDKESQEVPGDFMNTINHLTF----ESVATVALDRELGLLREANPPPEASK 231
            ..|....|.|||::|.:||.   |..:..:|.|.|    |::||:..:..||.| :...|.:..:
 Frog   120 NEVVEDLVKRIRKLRVQESD---GLTVTNVNDLYFKYSMEAIATILYECRLGCL-DDQIPQQTKE 180

  Fly   232 LFKNIEVLMDSF---FDLGVRPSLYR-YIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQ 292
            ..:.:|::...|   ...|..|...| .||.| :::|.|:.|.:|....::|:..:.:|:.:..:
 Frog   181 YIEALELMFSMFKTTMYAGAIPKWLRPLIPKP-WREFCRSWDGLFKFSQIHVDDRLRQIESQLEK 244

  Fly   293 GDSNDHKSVLEQLL---QIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVL 354
            |: .....||..||   ::|.:.......:||:.||||||..:|.....|||||..|:.:.::::
 Frog   245 GE-EVQGGVLTHLLLSKELDLEEIYANMTEMLLAGVDTTSFTLSWATYLLAKNPGIQEAVYQQIV 308

  Fly   355 SKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSF 419
            ... ......|.||:..:|.:|||:||:|||:||..||.|....|:|:.||.|||||:|.:.:..
 Frog   309 QNF-GKDQVPTAEDVPKMPLVRAVVKETLRLFPVLPGNGRVTQDDLVVGGYFIPKGTQLALCHYS 372

  Fly   420 LLKDDRLYPRAKEFIPERWLR-----RKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLE 479
            ...|...:|.|:||.||||:|     ||::             |..:|||:|.|.|:|:|:.:||
 Frog   373 TSYDAECFPAAEEFRPERWIRSGNLERKEN-------------FGSIPFGYGIRSCIGRRVAELE 424

  Fly   480 MELTVANLVRNFHIEYNYSTEKPY-KCRFLYKPNIPLKFKFTD 521
            |.|.:..|::||.|:.:..|.... |...|..|...:..:|.|
 Frog   425 MHLLLIQLLQNFEIKPSPQTTTVLPKTHGLLCPGGKINVRFVD 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_649052.1 CYP24A1-like 76..516 CDD:410677 139/457 (30%)
cyp27c1NP_001011341.1 cytochrome_P450 30..462 CDD:477761 139/458 (30%)

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