DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp27b1

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001006907.1 Gene:cyp27b1 / 448754 XenbaseID:XB-GENE-942527 Length:506 Species:Xenopus tropicalis


Alignment Length:538 Identity:142/538 - (26%)
Similarity:247/538 - (45%) Gaps:57/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVKHGLRANSQL-AATRNPDASSYVQQLESEWEGAKPFTELPGPTR----WQLF--RGFQKGGEY 62
            |:|.|...:||| ...:...|.:.::..|...:|.|...::|||:.    ..||  ||..:   .
 Frog     4 TLKLGSSRSSQLFRGLQELWAETVLKNSEKVIKGHKSLADMPGPSTVSFISDLFCRRGLAR---L 65

  Fly    63 HQLGMDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNK 127
            |:|.::.     |.:||.:.  ...||...||........|:|.|.||:.|:|...       :.
 Frog    66 HELQLEG-----KAKFGPVW--KASFGPILTVHVAEPSLIEQVLRQEGKHPIRSDL-------SS 116

  Fly   128 RKDEFFKNCMG-----LFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIRDK 187
            .||  ::.|.|     |...|.||.:.||.:...:::.:.|..|...:..|....:.:|...|.:
 Frog   117 WKD--YRQCRGHSYGLLTAEGEEWQQFRSILGKHMLKPKEVEAYSDVLNDVVGDLIKKINYQRSQ 179

  Fly   188 ESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVL-MDSFFDLGVRPS 251
            ....|..|..........|.:::|..:..:|.| |...|.|..|..::|..: :.:...:.:...
 Frog   180 NQNNVVKDIAKEFYMFGLEGISSVLFESRIGCL-EPTVPKETEKFIQSINTMFVMTLLTMAMPKF 243

  Fly   252 LYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGDSNDHKSVLEQLLQ--IDRKLAV 314
            |::....| ::||..:.|.:|.....::::.::.:.:|.:||:..:.|.:...|.|  |..|...
 Frog   244 LHKIFRKP-WQKFCESWDYMFAFAKGHIDKRMKDVAQKLAQGEKVEGKYLTYYLAQEKIPMKSIY 307

  Fly   315 VMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVI 379
            ....::|:.||||.|:.:|..|..||::|:.|..:..||...|...... :..|:..:|.|:||:
 Frog   308 GNVTELLLAGVDTISSTLSWSLYELAQHPDIQSAVYSEVEEILQGKQIP-SPSDVARMPLLKAVV 371

  Fly   380 KESLRLYPVTFGNAR-SAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKD 443
            ||.||||||..|||| .|..|:.:..|.|||.|.:.:.:....:|:.::....||.|:|||:::|
 Frog   372 KEVLRLYPVIPGNARVVADRDIQVGDYIIPKKTLITLCHYATSRDENVFSNPNEFQPDRWLKKED 436

  Fly   444 DDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTEKPYK---- 504
            ..          :.:..||||||.|.|:|:||.:||:.|.:|.::.:|.::    .|:|..    
 Frog   437 TH----------HPYASLPFGFGKRSCIGRRIAELEVYLALARILSHFEVK----PEQPGSLVMP 487

  Fly   505 -CRFLYKPNIPLKFKFTD 521
             .|.|..|...:..:|.:
 Frog   488 MTRTLLVPEKEINLQFLE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 127/471 (27%)
cyp27b1NP_001006907.1 p450 45..503 CDD:365848 131/493 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2442
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.010

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