DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and Cyp12a4

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster


Alignment Length:501 Identity:241/501 - (48%)
Similarity:333/501 - (66%) Gaps:14/501 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ESEWEGAKPFTELPGPTRWQL-FRGFQKGGEYHQLGMDDVMRLYKKQFGDICLIPGLFGMPSTVF 95
            :|||..||||.::|....|.| .:....||:|..:.:.::....::.:|||..:||:.|.|..:.
  Fly    38 DSEWLQAKPFEQIPRLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLS 102

  Fly    96 TFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMGLF-GNGAEWGKNRSAVNPVLMQ 159
            |.|.:.||.|:|.||.||.|.|...::::|.:.:.:|::..||:. ..|..||..|:.|||||||
  Fly   103 THNPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQ 167

  Fly   160 HRNVAIYLKPMQRVNRQFVNRIREIRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREAN 224
            .:||.:|.|.|.:||::||.||.|:||.::.|.|.||::|||..|.|||:.||||::||||:.:|
  Fly   168 PKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSN 232

  Fly   225 PPPEASKLFKNIEVLMDSFF----DLGVRPSLYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIER 285
            ...||.|||.    .:|.||    ||.::||.:|||.||..|:..||:|.|.:....||::||||
  Fly   233 KESEALKLFH----YLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAYVDEAIER 293

  Fly   286 IDRKSSQG--DSNDHKSVLEQLLQIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQR 348
            :|:::.:|  ...:.:||||:||::|||:|.||||||||.||||||:..:.:||.||||||||.|
  Fly   294 LDKEAKEGVVRPENEQSVLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFTALLLCLAKNPEKQAR 358

  Fly   349 LREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKL 413
            |||||:..|.:.:||||...||::|||||.||||.||:|:..||||....|.||.|||:|.||.:
  Fly   359 LREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLARDAVLSGYRVPAGTYV 423

  Fly   414 LMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMN--KDLNAFIYLPFGFGPRMCVGKRIV 476
            .:.....|..|..:|:|.||:||||||...|.:|....|  |..|.|::||||||||||||||||
  Fly   424 NIVPLNALTRDEYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVFLPFGFGPRMCVGKRIV 488

  Fly   477 DLEMELTVANLVRNFHIEYNYSTEKPYKCRFLYKPNIPLKFKFTDL 522
            ::|:||..|.|:|||::|:||.||..::...:..|||||||||.||
  Fly   489 EMELELGTARLIRNFNVEFNYPTENAFRSALINLPNIPLKFKFIDL 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 223/466 (48%)
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 224/462 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445003
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
Isobase 1 0.950 - 0 Normalized mean entropy S4812
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 1 1.000 - - FOG0000720
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 1 0.900 - - OOG6_100895
Panther 1 1.100 - - P PTHR24305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
1211.750

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