DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12c1 and Cyp313a3

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster


Alignment Length:533 Identity:107/533 - (20%)
Similarity:190/533 - (35%) Gaps:164/533 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNC 136
            |||...|    .|||..|:|.....|                     |.:|.|  |||.......
  Fly    24 RLYMMHF----KIPGPMGLPILGIAF---------------------EYLITY--KRKMSIRTKY 61

  Fly   137 MGLFGNGA-EWGKNRSAVNP---VLMQHRNVA--IYLKPMQRVNRQFVNRIREIRDKESQEVPGD 195
            |.::|:.. .|      |.|   |:.:...:|  |:|.| :.:||..:                 
  Fly    62 MDIYGSTCLVW------VGPTPFVITRDPKIAEEIFLSP-ECLNRSSI----------------- 102

  Fly   196 FMNTINHLTFESVATVALDRELGLLREANPPPEASKLF----------KNIEVLMDSFFDLG--- 247
            |...:|..|.:.:.::...:.:...:..||..:.:.|.          |.:...:||....|   
  Fly   103 FSKPVNSCTGDGLLSLEASKWVDRRKNLNPAFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEKK 167

  Fly   248 VRPSLYRY---IPTPT--------------------YKKFSRAM----------DEIFDTCSMY- 278
            ||..:.|:   |.|.|                    |:.|.:.:          ::||.|...: 
  Fly   168 VRDDIVRWSFRIATQTTVGTDVKKDASFKNDSVLKSYETFMKIIVMNVLLPFTHNKIFSTLGGFE 232

  Fly   279 ---------VNQAI-----ERIDRKSSQGDSNDHKSVLEQLLQI------DRKLAVVMAMDMLMG 323
                     ||:.|     :::..|...|...:..||:.:.:::      .|:.........::.
  Fly   233 TQKALAKSNVNKMIGTIVDKKLMTKPESGSQPEITSVINKAIELHRNGEMSREEVQSECCSFVVA 297

  Fly   324 GVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEF--TVEDMKSLPYLRAVIKESLRLY 386
            ..:||...:...|:.||..||.|..:.:| |.:|..:..:|  |.:|::.:.:|..|:.|:|||.
  Fly   298 AFETTGDTVYHALILLAMFPEHQDTVYQE-LKELFPVAGDFEVTYDDLQRMVFLERVVNETLRLI 361

  Fly   387 PVTFGNARSAGADVVL-DGYRIPKGT----KLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDK 446
            |......|....|..| .|..||||.    .:..|:.   ..|........|.|:.:|      .
  Fly   362 PSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHR---NRDHWGTDPSSFNPDHFL------P 417

  Fly   447 SDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTEKPYKCRFLYKP 511
            .:|   :|.:.:.|:||..|.|.|:|.:...:..:|.::.::||              |:     
  Fly   418 DNV---RDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRN--------------CK----- 460

  Fly   512 NIPLKFKFTDLKY 524
             :...|::.||::
  Fly   461 -VSTSFRYEDLEF 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 103/509 (20%)
Cyp313a3NP_650170.2 p450 33..463 CDD:299894 99/509 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442745
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.