DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp27a1.4

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001315442.1 Gene:cyp27a1.4 / 322341 ZFINID:ZDB-GENE-030131-1060 Length:522 Species:Danio rerio


Alignment Length:534 Identity:149/534 - (27%)
Similarity:259/534 - (48%) Gaps:56/534 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVKHGLRANSQLAATRNPDASSYVQ------QLESEWEGAKPFTELPGPTRWQ-LFRGFQKGGEY 62
            |...|.|.    ||..:..||..||      :.|::....|.||.|     :| ||:|:.  ...
Zfish    22 TAATGFRR----AAGNSAAASVSVQDGHRKLKTEADLPEIKIFTML-----YQMLFKGYL--NSV 75

  Fly    63 HQLGMDDVMRLYKKQ-FGDICLI--PGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHY 124
            |:|      :||:|| :|.:..|  ..|.|:..|    :||..|::.|.:.::|.||.......:
Zfish    76 HEL------QLYQKQVYGPLWKINAGNLQGISIT----SVELLEELLRKDEKYPCRGYMTLWTEH 130

  Fly   125 RNKRKDEFFKNCMGLF-GNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIRD-K 187
            |:.|...:     |.| ..|.:|.|.|:.:|..::..::...|...:..|...|:.||..:|: .
Zfish   131 RDLRGISY-----GPFTEEGEKWYKLRAVLNKRMLHPKDSLQYGDVVNAVITDFIKRIYYLREMS 190

  Fly   188 ESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGVRPSL 252
            .:.::..:..|.:...:.|.:|::..:..:|.| |...|.|..:...:|..:......:.:.|:.
Zfish   191 PTGDLVSNLTNELYRFSLEGIASILFETRIGCL-EKEIPAETQEFINSIAQMFTYNMHVALLPNW 254

  Fly   253 YR-YIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRK--SSQGDSNDHKSVLEQLLQIDRKLAV 314
            .| |:  |.::|:....|.||...:..:|..:|.|..:  ::|..:.::.:.|....::..|...
Zfish   255 TRNYL--PFWQKYIDGWDGIFKFGTKMINLKMEAIQTRLDTNQEVAGEYLTYLLSSGKMSCKDVY 317

  Fly   315 VMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVI 379
            ....::|:.||||||..:...|..|:|:|..|:.|.:|| :|:.......|.|::.|:|:|:|||
Zfish   318 GSVSEVLLAGVDTTSNTMLWALYLLSKDPAAQETLHQEV-TKVLKGDRIPTAEEVNSMPFLKAVI 381

  Fly   380 KESLRLYPVTFGNAR-SAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKD 443
            ||:||||||...|:| .|.::|::..|..||.|...:.:..:..|::::|..::|.||||||   
Zfish   382 KETLRLYPVVPVNSRLIAESEVIIGEYLFPKKTTFNLFHYAISHDEKVFPEPQKFKPERWLR--- 443

  Fly   444 DDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYST-EKPYKCRF 507
            |.::..      |.|..:|||||.|.|||:||.:|||.|.:|.|::.|.:..:.:. |.....|.
Zfish   444 DGRTRP------NPFGSIPFGFGVRACVGRRIAELEMHLALARLIKLFEMRPDPTVGEVKANFRS 502

  Fly   508 LYKPNIPLKFKFTD 521
            :..||..:...|.:
Zfish   503 VLVPNKKVNLHFVE 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 131/467 (28%)
cyp27a1.4NP_001315442.1 p450 66..505 CDD:278495 131/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 1 0.900 - - OOG6_100895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.780

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