DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12c1 and Cyp4d1

DIOPT Version :10

Sequence 1:NP_649052.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:535 Identity:137/535 - (25%)
Similarity:223/535 - (41%) Gaps:110/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LPGPTRWQLFRGFQKGGEYHQLG---------MDDVMRLYKK-QFGDICLIPG---LFGMPSTV- 94
            :|||....|.     |..:|.:|         :.:.|..|.| |...:.|.|.   |.|.|..| 
  Fly    34 MPGPPVLPLV-----GHGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVE 93

  Fly    95 -----FTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMGLFGNGAEWGKNRSAVN 154
                 ..||.:..|  |:....|...|                     .|...|.:|.|.|..:.
  Fly    94 VVLGTLRFNDKAGE--YKALEPWLKEG---------------------LLVSRGRKWHKRRKIIT 135

  Fly   155 PVLMQHRNVAIYLKPMQRVNRQFVNRIRE-IRDKESQEVP-GD----FMNTINHLTFESVATVAL 213
            |        |.:.|.:.:....|....|: :|:.|...:. ||    ..:.||..|.:::...|:
  Fly   136 P--------AFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICETAM 192

  Fly   214 DRELGLLREANPPPEASKLFKNIE-VLMDSFFDLGVRPSLYR----YIPTPTYKKFSRAMDEIFD 273
            .  :.:..::|...|..:..|.|. ||....|::     |||    |:.||..:...:|::.:..
  Fly   193 G--VSINAQSNADSEYVQAVKTISMVLHKRMFNI-----LYRFDLTYMLTPLARAEKKALNVLHQ 250

  Fly   274 TCSMYVNQAIERIDRK-SSQGDSNDHKSV--------LEQLLQ--IDRK----LAVVMAMDMLM- 322
            .....:.|..|.:.|: |||..|||...|        |:.|||  :|.:    |.:...:|..| 
  Fly   251 FTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMF 315

  Fly   323 GGVDTTSTAISGILLNLAKNPEKQQRLREEVLS-----KLTSLHSEFTVEDMKSLPYLRAVIKES 382
            .|.||||:|:.....|:|.:||.|::..||:.|     |.|.:..|.    :..|.|:...:||:
  Fly   316 EGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYEL----LNQLHYVDLCVKET 376

  Fly   383 LRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKS 447
            ||:||......|....|..::|..||.||.:.::..:|.:.:.|:.....|.|||:         
  Fly   377 LRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPERF--------- 432

  Fly   448 DVLMNKD-LNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEY-NYSTEKPYK-CRFLY 509
            ||:...: ||.:.|:||..|||.|:|::...||::..|||::|::.::: ..|:|.|.. ...:.
  Fly   433 DVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELIL 497

  Fly   510 KPNIPLKFKFTDLKY 524
            :...||.||..:..|
  Fly   498 RTKEPLMFKVRERVY 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_649052.1 CYP24A1-like 76..516 CDD:410677 124/484 (26%)
Cyp4d1NP_476907.2 CYP4 73..504 CDD:410721 122/481 (25%)

Return to query results.
Submit another query.