DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and Cyp24a1

DIOPT Version :10

Sequence 1:NP_649052.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_963966.1 Gene:Cyp24a1 / 25279 RGDID:2462 Length:514 Species:Rattus norvegicus


Alignment Length:464 Identity:140/464 - (30%)
Similarity:227/464 - (48%) Gaps:46/464 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TELPGPTRWQLFRG----FQKGGEYHQLGMDDVMRLYKKQFGDICLIP-GLF-----GMPSTVFT 96
            |.|||||.|.|...    |.|||...|   .|.:..|.|::|.|..:. |.|     |.||.:  
  Rat    56 TSLPGPTNWPLLGSLLEIFWKGGLKKQ---HDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLL-- 115

  Fly    97 FNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKDEFFKNCMGL-FGNGAEWGKNRSAVNPVLMQH 160
                  |.:||||...|.|...:|...||:.|.:.:     || ...|.||.:.|||....||:.
  Rat   116 ------EALYRTESAHPQRLEIKPWKAYRDHRNEAY-----GLMILEGQEWQRVRSAFQKKLMKP 169

  Fly   161 RNVAIYLKPMQRVNRQFVNRIREIRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREANP 225
            ..:....|.:..|...|:.|:.|:.| |...:| |..:.:|..:|||:..|..::..|||:: ..
  Rat   170 VEIMKLDKKINEVLADFLERMDELCD-ERGRIP-DLYSELNKWSFESICLVLYEKRFGLLQK-ET 231

  Fly   226 PPEASKLFKNIEVLMDSFFDLGVRP-SLYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRK 289
            ..||......|:.:|.:|..:.|.| .|::.:.|..::..:.|.|.||.:....::..::|.   
  Rat   232 EEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRY--- 293

  Fly   290 SSQGDSNDHKSVLEQLLQIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVL 354
             ||....|....:.|...:.:|.......::.:..|:||:.::..||.||::||:.|:||.:||.
  Rat   294 -SQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ 357

  Fly   355 SKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSF 419
            |.|....:. ..||::::|||:|.:|||:||.|......|:.....||..|.:||||.|.:....
  Rat   358 SVLPDNQTP-RAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQV 421

  Fly   420 LLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTV 484
            |...:..:..:.:|.|||||:::          |.:|.|.:||||.|.|||:|:|:.:|::.|.:
  Rat   422 LGSSEDNFEDSHKFRPERWLQKE----------KKINPFAHLPFGIGKRMCIGRRLAELQLHLAL 476

  Fly   485 ANLVRNFHI 493
            ..:::.:.|
  Rat   477 CWIIQKYDI 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_649052.1 CYP24A1-like 76..516 CDD:410677 125/426 (29%)
Cyp24a1NP_963966.1 CYP24A1 90..508 CDD:410738 125/427 (29%)

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