DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12c1 and cyp-35B3

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_504095.1 Gene:cyp-35B3 / 187092 WormBaseID:WBGene00019470 Length:499 Species:Caenorhabditis elegans


Alignment Length:525 Identity:136/525 - (25%)
Similarity:216/525 - (41%) Gaps:107/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGPTRWQLFRGFQKGGEY--HQLGMDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYR 107
            |||..:.:.....:...|  ...||...:.|::|.:|::..|  ..|....|...:.||.::|: 
 Worm    27 PGPIAFPIIGNIPQVAYYVWKTEGMVPALDLFRKTYGNVFTI--WLGPIPHVSICDYETSQEVF- 88

  Fly   108 TEGQWPVRGGAEPVIHYRNKRKDEFF--------KNCMGLFGNGAEWGKNRSAVNPVLMQHRNVA 164
                  |:.|        ||.||...        :|...|..||..|.:.|..   .|:..||:.
 Worm    89 ------VKNG--------NKFKDRLLPPIFIHVSENLGLLTANGDSWAEMRGF---TLLAFRNMG 136

  Fly   165 IYLKPMQRVNRQFVNRIREIRDKESQEVPGDFMN--TINHLT--FE-SVATVALDRELGLLREAN 224
            :....|::       ||.:..:....|:..|.:|  ||..::  |: :|.:|.....:|...||:
 Worm   137 VGKDLMEK-------RILDELNARCAEIDADAVNGKTIVKISDFFDLTVGSVINSTLVGKRFEAH 194

  Fly   225 PPPEASKLFKNIEVLMDSF--FDLGVRP--SLYRYIPTPTYKKFSRAMDEIFDTCSMYVN-QAIE 284
            ...|...|.|.|.|..|.|  ||:.| |  .|..:.|    .:|:|:: ||.:....||: :|.:
 Worm   195 NKDEFLHLKKIIHVSSDIFTTFDMTV-PVWVLKTFFP----GRFARSV-EIQEEVLKYVSREASK 253

  Fly   285 RIDRKSSQGD----SNDHKSVLEQLL-QID-------------RKLAVVMAMDMLMGGVDTTSTA 331
            |.| |...|:    |.|.:..:|..| :||             |.|..|:| |:.:.|.|||:|.
 Worm   254 RYD-KMKLGEYTPSSEDPQDFVEAFLAKIDQEEQTGGPTHFTMRCLNQVIA-DLWLAGQDTTATT 316

  Fly   332 ISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLR---LYPVTFGNA 393
            :......|..|||..::.|||::....:.:....::|.....||.|.|.|..|   :..|.|.  
 Worm   317 LVSGFNQLVNNPEVMRKCREEIMKITENGYRPLQLKDRAETHYLNATIAEIQRHASILNVNFW-- 379

  Fly   394 RSAGADVVLDGYRIPKGTKL------LMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMN 452
            |......:::||.|..|..:      |..|:.:.||      ..:|.|||::..          .
 Worm   380 RLVHEPTIVNGYEIDAGAVITSQLGALHVNNDIFKD------PSKFYPERFIEN----------G 428

  Fly   453 KDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYS-----TEKPYKCRFLYKPN 512
            |.||..|  |||.|.|.|||:.|...|:.|.:.||:..:.|:.:.|     .:.||....:....
 Worm   429 KLLNQII--PFGIGKRSCVGENIARSELYLMIGNLLLRYDIKPHGSLPSLDDKLPYSVGKMPDKT 491

  Fly   513 IPLKF 517
            :.|:|
 Worm   492 VELEF 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 132/508 (26%)
cyp-35B3NP_504095.1 p450 26..481 CDD:278495 132/508 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4812
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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