DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and Cyp27a1

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_077226.2 Gene:Cyp27a1 / 104086 MGIID:88594 Length:533 Species:Mus musculus


Alignment Length:512 Identity:133/512 - (25%)
Similarity:242/512 - (47%) Gaps:63/512 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLRANSQLAA-------TRNPDASSYVQQLESEWEGAKPFTELPGPTRWQ-LFRGFQKGGEYHQL 65
            |.||.:.:.|       |..|.......:|.|.       .||||....| ||:.|.:|   :.|
Mouse    27 GARAKATIPAALQAQESTEGPGTGQDRPRLRSP-------AELPGTGTLQFLFQLFLQG---YVL 81

  Fly    66 GMDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRNKRKD 130
            .:.|:..|.|.::|.:....  ||..:.|...:....|:|.|.||::|:|...:....:|:.:..
Mouse    82 HLPDLQVLNKTKYGPMWTTS--FGTYTNVNLASAPLLEQVMRQEGKYPIRDHMDQWKDHRDHKGL 144

  Fly   131 EFFKNCMGLF-GNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIR-DKESQEVP 193
            .:     |:| ..|.:|...|.|:...|::....|:|...:..|...|:.|:.::| :.||.:..
Mouse   145 TY-----GIFIAQGEQWYHLRQALKQRLLKPDEAALYTDALNEVISDFITRLDQVRAESESGDQV 204

  Fly   194 GDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMD-----SFFDLGVRPSLY 253
            .|..:.:.||..|::..:..::.:|.|:.:.|...|: ..:::.::..     :|.....||.| 
Mouse   205 PDMAHLLYHLALEAITYILFEKRIGCLKPSIPEDTAA-FIRSVAIMFQNSVYITFLPKWTRPLL- 267

  Fly   254 RYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGDSND-------HKSVLEQLLQIDRK 311
                 |.:|::....|.||......:::.::.:..:..:...:.       |..:..:||.....
Mouse   268 -----PFWKRYLNGWDNIFSFGKKLIDEKVQELKAQLQETGPDGVRVSGYLHFLLTNELLSTQET 327

  Fly   312 LAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKL----TSLHSEFTVEDMKSL 372
            :...  .::|:.||||||..::..|.:|:|:||.|:.|.:||...:    ...|.:|.     .:
Mouse   328 IGTF--PELLLAGVDTTSNTLTWALYHLSKSPEIQEALHKEVTGVVPFGKVPQHKDFA-----HM 385

  Fly   373 PYLRAVIKESLRLYPVTFGNAR-SAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPE 436
            |.|:|||||:||||||...|:| ....:..::|:..||.|:.::.:..:.:|..::|....|.|.
Mouse   386 PLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPNSFQPH 450

  Fly   437 RWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHI 493
            ||||:|:.|...:     |:.|..:|||:|.|.|:|:||.:|||:|.::.||:.:.|
Mouse   451 RWLRKKEADNPGI-----LHPFGSVPFGYGVRSCLGRRIAELEMQLMLSRLVQKYEI 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 123/469 (26%)
Cyp27a1NP_077226.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..60 5/32 (16%)
p450 82..527 CDD:278495 115/447 (26%)
Sterol-binding. /evidence=ECO:0000255 386..400 10/13 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3255
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3800
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48087
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8705
orthoMCL 1 0.900 - - OOG6_100895
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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