DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12c1 and LOC101731070

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_031760322.1 Gene:LOC101731070 / 101731070 -ID:- Length:517 Species:Xenopus tropicalis


Alignment Length:542 Identity:146/542 - (26%)
Similarity:232/542 - (42%) Gaps:76/542 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVKHGLRANS------QLAATRNPDASSYVQQLESEWEGAKPFTELP--GPTRWQLFRGFQKGGE 61
            ||: |||..|      |||.......|:..|.|        ||..:|  |...|.....:.|...
 Frog    22 TVR-GLRTKSTHFSTVQLAQDSQSLTSAKAQSL--------PFKSIPCTGRNAWANLARYWKNNS 77

  Fly    62 YHQLGMDDVMRLYKKQFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVRGGAEPVIHYRN 126
            :.||.:  ||..:.:..|.|  .....|..|:|...:.:...:::::||.:|.|.|.|....:|:
 Frog    78 FQQLHL--VMEGHFQNLGPI--YRETLGTHSSVNIIHPQDVARLFQSEGVFPRRMGIEAWAAHRD 138

  Fly   127 KRKDEFFKNCMGLFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVN-RIREIRDKESQ 190
            .|..:    |.....||.:|..:|..:|..::....|..:|..:..|...||: .:|.|......
 Frog   139 LRNHK----CGVFLLNGEDWRSDRLILNKEVLSLTGVKKFLPFLDEVANDFVSFLMRRINKNTRG 199

  Fly   191 EVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGVRP-SLYR 254
            .:..|....:...|.|:...|...:.||||.| :|..::.:..:.:|.::.:...|...| .|.|
 Frog   200 TLTVDLYADLFRFTMEASGYVLYGQRLGLLEE-HPNEDSLRFIRAVETMIKTTLPLVYLPHQLLR 263

  Fly   255 YIPTPTYKKFSRAMDEIF---DTCSMYVNQAIERIDRKSSQGDSNDHKSVL-EQLLQIDRKLAVV 315
            ...:..:.:...|.|.||   |.|       |:.|.::...|....:..:: |.|||.:..|..:
 Frog   264 LTDSALWTQHMEAWDVIFQQADRC-------IQNIYQEFCLGQERGYSGIMAELLLQGELPLDSI 321

  Fly   316 MA--MDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEV----------LSKLTSLHSEFTVED 368
            .|  .:::.||||||:..:...|..||:||..||.||.|:          :::|           
 Frog   322 TANVTELMAGGVDTTAMPLLFTLFELARNPSVQQELRAEIKRAEGQCPKDMNQL----------- 375

  Fly   369 MKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEF 433
            :.|:|.|:..|||:||||||.....|....|:||..|.||.||.:.:....:.:...|:.....:
 Frog   376 LNSMPLLKGAIKETLRLYPVGITVQRYPMKDIVLQNYHIPAGTLVQVGLYPMGRSSELFQNPLRY 440

  Fly   434 IPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYS 498
            .|.||:||            |...|..|.||||.|.|:|:||.:.||.|.:.::::||.|.....
 Frog   441 DPTRWMRR------------DETNFKALAFGFGSRQCIGRRIAETEMMLFLMHMIKNFQINTVCK 493

  Fly   499 TEKPYKCRFLYKPNIP--LKFK 518
            .:.....||:..|..|  |.|:
 Frog   494 DDIKTVFRFILMPEKPPLLTFR 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 126/476 (26%)
LOC101731070XP_031760322.1 CYP11B 89..514 CDD:410737 123/461 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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