DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and cyp24a1

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_012808417.2 Gene:cyp24a1 / 100497429 XenbaseID:XB-GENE-479201 Length:508 Species:Xenopus tropicalis


Alignment Length:507 Identity:141/507 - (27%)
Similarity:242/507 - (47%) Gaps:63/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTVKHGLRANSQLAATRNPDASSYVQQLESEWEGAK----PFTELPGPTRWQLFRG----FQKGG 60
            ::|:|.:           |.|::.....|.|.....    ....|||||:..:...    .:|||
 Frog    19 ISVQHSI-----------PTATAVCDLKEEELPAPSSCPHSLAALPGPTKLPILGSLLDILRKGG 72

  Fly    61 EYHQLGMDDVMRLYKKQFGDICLIP-GLF-----GMPSTVFTFNVETFEKVYRTEGQWPVRGGAE 119
            ...|   .:.:..|.||||.|..:. |.|     |.|..:        |.:||.|..:|.|...:
 Frog    73 LKRQ---HEALASYHKQFGKIFRMKLGSFDSVHIGAPCLL--------EALYREESNYPKRLEIK 126

  Fly   120 PVIHYRNKRKDEFFKNCMG-LFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIRE 183
            |...||:.|.:.:     | |...|.:|.:.|||....||:...|......:..|...|:.||..
 Frog   127 PWKAYRDYRDEAY-----GLLILEGKDWQRVRSAFQQKLMKPTEVGKLDTKINEVLVDFMKRIDS 186

  Fly   184 IRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGV 248
            :.|::.  ...|....:|..:.||:..|..::..|.| :.|...||......|:::|.:|..:.|
 Frog   187 VCDEDG--TIEDLYCELNKWSLESICLVLYEKRFGFL-QPNLGEEAQNFITAIKMMMSTFGLMMV 248

  Fly   249 RP-SLYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGDSNDHKSVLEQLLQIDRKL 312
            .| .|::.:.|..:|..:.|.|.||.|...::::   |:.:.||:| |.|....:....::.:|.
 Frog   249 TPVELHKSLNTKIWKDHTHAWDSIFKTAKCHIDR---RLTKLSSKG-SEDFLCTIYNDSKLSKKE 309

  Fly   313 AVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEF-TVEDMKSLPYLR 376
            ......:||:|.|:||:.::...:.|:::||..|::|.||:.|.|  |..:. |.:|::::|||:
 Frog   310 MYATITEMLIGAVETTANSLLWAIFNISRNPHIQKKLLEEIESVL--LPDQVPTADDIRNMPYLK 372

  Fly   377 AVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRR 441
            |.:|||:|:.|......|:...:.||..|.:||||.|.:.:..|..:...:....:|.|||||::
 Frog   373 ACLKESMRITPSIPFTTRTLDKETVLGDYVLPKGTVLTINSHVLGSNQECFDNWNQFRPERWLQQ 437

  Fly   442 KDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHI 493
            |:          .:|.|.::|||.|.|||:|:|:.:|:::||:..|:|.:.|
 Frog   438 KN----------TINPFAHVPFGIGKRMCIGRRLAELQLQLTLCWLIRKYEI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 134/462 (29%)
cyp24a1XP_012808417.2 CYP24A1 84..502 CDD:410738 125/428 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 1 1.000 - - FOG0000720
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2442
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.000

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