DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12c1 and LOC100496967

DIOPT Version :9

Sequence 1:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_031760480.1 Gene:LOC100496967 / 100496967 -ID:- Length:438 Species:Xenopus tropicalis


Alignment Length:459 Identity:135/459 - (29%)
Similarity:231/459 - (50%) Gaps:56/459 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LFRGFQKGGEYHQLGMDDVMRLYKK-QFGDICLIPGLFGMPSTVFTFNVETFEKVYRTEGQWPVR 115
            :|:..||.|:..::.:.    .:|. |.||..::               |||   .|||..:|.|
 Frog     1 MFKYHQKFGKIFKMNLG----FFKSVQIGDPTML---------------ETF---LRTESIYPKR 43

  Fly   116 GGAEPVIHYRNKRKDEFFKNCMGLFGNGAEWGKNRSAVNPVLMQHRNVAIYLKPMQ-RVNR---Q 176
            ...:|...||:.|::.    |..|..:|.||.:.|.|....||:.:.:.    ||. |:|.   .
 Frog    44 MDIKPWKMYRDYREEA----CGLLILDGQEWFQMRRATQNKLMKPKEIF----PMDLRINEVMAD 100

  Fly   177 FVNRIREIRDKESQEVPGDFMNTINHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMD 241
            |:..|..|.|:..  ...|..:.:|.|::|::..|..:...|||:: ....||....|:::.:|.
 Frog   101 FIPYIDNICDENG--CIADLYSELNKLSYETICYVLYNERYGLLQQ-TCKEEALLFIKSVKEMMY 162

  Fly   242 SFFDLGVRPS-LYRYIPTPTYKKFSRAMDEIFDTCSMYVNQAIERIDRKSSQGDSNDHKSVLEQL 305
            ....|.|..: |::...|..::..::|.|.||.|    |.:.|::...::|.|..:....|:...
 Frog   163 YLGPLIVSSAELHKKFNTKQWQNHTKAWDNIFLT----VKRCIDKSLAQNSVGKRDHLLHVINSD 223

  Fly   306 LQIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMK 370
            ..:.||....:..::.:|||:||:.::..|:|:|::|.:.||:|.||:.|...|..:. |...::
 Frog   224 NLLTRKQLYGIFAELQIGGVETTANSLMWIMLHLSRNKDVQQKLLEEIQSTCPSYQAP-TASMLQ 287

  Fly   371 SLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIP 435
            |||||::.||||:||.|.....:|:...|..:.||.||:||..::....:..:|..:|.|:|:.|
 Frog   288 SLPYLKSCIKESMRLTPTVPFTSRTLEEDTNIGGYLIPQGTIAMINFHAMTWNDEFFPHAQEYKP 352

  Fly   436 ERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTE 500
            |||::.|          ..:|.|.:.|||.|.|||:|:|:.:|:::||:..||:||||  |...|
 Frog   353 ERWMKDK----------HTINPFAHTPFGIGKRMCIGRRLAELQLQLTLCWLVKNFHI--NAIDE 405

  Fly   501 KPYK 504
            :|.|
 Frog   406 EPVK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 133/455 (29%)
LOC100496967XP_031760480.1 cytochrome_P450 5..423 CDD:425388 134/455 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 1 1.000 - - FOG0000720
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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