Protein Alignment Chmp1 and Chmp1b

DIOPT Version :10

• Sequence 1: NP_649051.3
• Gene: Chmp1 / 40036
• FlyBaseID: FBgn0036805
• Length: 203
• Species: Drosophila melanogaster
• Sequence 2: NP_001103003.1
• Gene: Chmp1b / 689364
• RGDID: 1593500
• Length: 196
• Species: Rattus norvegicus
• Alignment Length: 195
• Identity: 148/195 - (75%)
• Similarity: 167/195 - (85%)
• Gaps: 2/195 - (1%)

  Fly     6 MEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRM 70
            |||||||||||.|||.|::|||:||||.||||.|||||||||:||||||||||||||||||:|||
  Rat     1 MEKHLFNLKFAAKELNRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRM 65

  Fly    71 SARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVME 135
            ||||||||:|||:|:|..|||.|||||||:|||.:|.|||||||:||:|||.|||.||||:..||
  Rat    66 SARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQME 130

  Fly   136 GTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRLARLR 200
            .|||.|.|.:.||..||.|||::||||||:||||||.| |:.|||.|.| |.|||||:|||||||
  Rat   131 DTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQG-QTGSVGTSVA-SAEQDELSQRLARLR 193

  Fly   201  200
              Rat   194  193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chmp1	NP_649051.3	Snf7	<42..172	CDD:460896	98/129 (76%)
Chmp1b	NP_001103003.1	Snf7	8..161	CDD:460896	115/152 (76%)