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Protein Alignment Chmp1 and CHMP3

DIOPT Version :9

Sequence 1:	NP_001287108.1	Gene:	Chmp1 / 40036	FlyBaseID:	FBgn0036805	Length:	203	Species:	Drosophila melanogaster
Sequence 2:	NP_057163.1	Gene:	CHMP3 / 51652	HGNCID:	29865	Length:	222	Species:	Homo sapiens

Alignment Length:	223	Identity:	50/223 - (22%)
Similarity:	99/223 - (44%)	Gaps:	44/223 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 KHLFN-----LKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNY 67
            |.|.|     ::..::.::|..:..::||:..|...|.|.:||..||..:.|:..||.:......
Human    13 KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKL 77

  Fly    68 LRMSARVDAVASRVQSALTTRKVTGSM---AGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDV 129
            ....|.:::|...:::.|...:|.||:   ..|:|||.:.:|   :.:|.:.|.:...:.    :
Human    78 YASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK---IPEIQATMRELSKEM----M 135

  Fly   130 QSSVMEGTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMEL-----------PSGV-----QSQS 178
            ::.::|..:.||..:...|       :::.:||.:|::..|           ||.|     :.:.
Human   136 KAGIIEEMLEDTFESMDDQ-------EEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEP 193

  Fly   179 VGASTAVSQEQDE------LTQRLARLR 200
            .||..|...|::|      :..|||.||
Human   194 PGAMAASEDEEEEEEALEAMQSRLATLR 221

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.